[R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

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[R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Spencer Graves
Hello, All:


       Might "R CMD check" on Mac use obsolete LaTeX software?


       I ask, because "R CMD check" on my Mac started reporting LaTeX
errors on *.Rd files that previously passed "R CMD check" without
problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
that.  I did that and got the following:


             * "In a current tex system \textasciigrave should work with
your families - they don't have the glyph but latex will fall back
without error. In older systems it could give an error."


See:


https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided


       Comments?
       Thanks,
       Spencer Graves


p.s.  An earlier post on this issue to r-pkg-devel is copied below.


-------- Forwarded Message --------
Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
(textcomp)
Date: Sun, 16 Feb 2020 14:21:17 -0600
From: Spencer Graves <[hidden email]>
To: [hidden email]



Hello, All:


       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
following:


! Package textcomp Error: Symbol \textasciigrave not provided by
(textcomp)                font family zi4 in TS1 encoding.
(textcomp)                Default family used instead.

See the textcomp package documentation for explanation.
* checking PDF version of manual without hyperrefs or index ... ERROR
* DONE


       This is using R 3.6.2 under macOS 10.15.3 applied to the current
development version of "https://github.com/sbgraves237/Ecfun".  Travis
CI reported that the build passed;  see
"https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".



       This looks to me like it's complaining about the use of the back
tick character ("`", below "~" on the top left key on a standard
American English keyboard), which I assume is equivalent to
"\textasciigrave" in certain contexts.


       Six out of those 8 repetitions occur in the examples sections of
files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
"subNonStandardNames.Rd". Those functions were written to fix parsing
errors with names like "Raúl" that had been mangled by different
software before I could get it into R.


       After a day's work failed to produce a work around, I decided to
ask this group.


       What do you suggest?
       Thanks,
       Spencer Graves

______________________________________________
[hidden email] mailing list
https://stat.ethz.ch/mailman/listinfo/r-package-devel

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Duncan Murdoch
On 12/05/2020 6:17 p.m., Spencer Graves wrote:

> Hello, All:
>
>
>         Might "R CMD check" on Mac use obsolete LaTeX software?
>
>
>         I ask, because "R CMD check" on my Mac started reporting LaTeX
> errors on *.Rd files that previously passed "R CMD check" without
> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
> that.  I did that and got the following:

If I understand correctly, this error is showing up on *your* Mac.  So
isn't it easy for you to check if LaTeX is up to date?

The \textasciigrave macro has been used by Rd.sty and Sweave.sty since
2013, so it's nothing new on R's end.

Duncan Murdoch


>
>
>               * "In a current tex system \textasciigrave should work with
> your families - they don't have the glyph but latex will fall back
> without error. In older systems it could give an error."
>
>
> See:
>
>
> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>
>
>         Comments?
>         Thanks,
>         Spencer Graves
>
>
> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>
>
> -------- Forwarded Message --------
> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
> (textcomp)
> Date: Sun, 16 Feb 2020 14:21:17 -0600
> From: Spencer Graves <[hidden email]>
> To: [hidden email]
>
>
>
> Hello, All:
>
>
>         "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
> following:
>
>
> ! Package textcomp Error: Symbol \textasciigrave not provided by
> (textcomp)                font family zi4 in TS1 encoding.
> (textcomp)                Default family used instead.
>
> See the textcomp package documentation for explanation.
> * checking PDF version of manual without hyperrefs or index ... ERROR
> * DONE
>
>
>         This is using R 3.6.2 under macOS 10.15.3 applied to the current
> development version of "https://github.com/sbgraves237/Ecfun".  Travis
> CI reported that the build passed;  see
> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>
>
>
>         This looks to me like it's complaining about the use of the back
> tick character ("`", below "~" on the top left key on a standard
> American English keyboard), which I assume is equivalent to
> "\textasciigrave" in certain contexts.
>
>
>         Six out of those 8 repetitions occur in the examples sections of
> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
> "subNonStandardNames.Rd". Those functions were written to fix parsing
> errors with names like "Raúl" that had been mangled by different
> software before I could get it into R.
>
>
>         After a day's work failed to produce a work around, I decided to
> ask this group.
>
>
>         What do you suggest?
>         Thanks,
>         Spencer Graves
>
> ______________________________________________
> [hidden email] mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Simon Urbanek
In reply to this post by Spencer Graves
Spencer,

as Duncan pointed out that is an issue on your machine, so only you can fix it. The checks use whatever you give them.

FWIW the macOS CRAN setup uses TeX Live 2019:

$ pdflatex --version | head -n1
pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)

You can upgrade your TeX installation if you so desire, the latest version for macOS is available from
https://tug.org/mactex/mactex-download.html
and other TeX mirrors.

Cheers,
Simon



> On 13/05/2020, at 10:17 AM, Spencer Graves <[hidden email]> wrote:
>
> Hello, All:
>
>
>       Might "R CMD check" on Mac use obsolete LaTeX software?
>
>
>       I ask, because "R CMD check" on my Mac started reporting LaTeX
> errors on *.Rd files that previously passed "R CMD check" without
> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
> that.  I did that and got the following:
>
>
>             * "In a current tex system \textasciigrave should work with
> your families - they don't have the glyph but latex will fall back
> without error. In older systems it could give an error."
>
>
> See:
>
>
> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>
>
>       Comments?
>       Thanks,
>       Spencer Graves
>
>
> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>
>
> -------- Forwarded Message --------
> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
> (textcomp)
> Date: Sun, 16 Feb 2020 14:21:17 -0600
> From: Spencer Graves <[hidden email]>
> To: [hidden email]
>
>
>
> Hello, All:
>
>
>       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
> following:
>
>
> ! Package textcomp Error: Symbol \textasciigrave not provided by
> (textcomp)                font family zi4 in TS1 encoding.
> (textcomp)                Default family used instead.
>
> See the textcomp package documentation for explanation.
> * checking PDF version of manual without hyperrefs or index ... ERROR
> * DONE
>
>
>       This is using R 3.6.2 under macOS 10.15.3 applied to the current
> development version of "https://github.com/sbgraves237/Ecfun".  Travis
> CI reported that the build passed;  see
> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>
>
>
>       This looks to me like it's complaining about the use of the back
> tick character ("`", below "~" on the top left key on a standard
> American English keyboard), which I assume is equivalent to
> "\textasciigrave" in certain contexts.
>
>
>       Six out of those 8 repetitions occur in the examples sections of
> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
> "subNonStandardNames.Rd". Those functions were written to fix parsing
> errors with names like "Raúl" that had been mangled by different
> software before I could get it into R.
>
>
>       After a day's work failed to produce a work around, I decided to
> ask this group.
>
>
>       What do you suggest?
>       Thanks,
>       Spencer Graves
>
> ______________________________________________
> [hidden email] mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>

_______________________________________________
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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Ken Beath
In reply to this post by Spencer Graves
Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.

Ken

> On 13 May 2020, at 8:17 am, Spencer Graves <[hidden email]> wrote:
>
> Hello, All:
>
>
>       Might "R CMD check" on Mac use obsolete LaTeX software?
>
>
>       I ask, because "R CMD check" on my Mac started reporting LaTeX
> errors on *.Rd files that previously passed "R CMD check" without
> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
> that.  I did that and got the following:
>
>
>             * "In a current tex system \textasciigrave should work with
> your families - they don't have the glyph but latex will fall back
> without error. In older systems it could give an error."
>
>
> See:
>
>
> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>
>
>       Comments?
>       Thanks,
>       Spencer Graves
>
>
> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>
>
> -------- Forwarded Message --------
> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
> (textcomp)
> Date: Sun, 16 Feb 2020 14:21:17 -0600
> From: Spencer Graves <[hidden email]>
> To: [hidden email]
>
>
>
> Hello, All:
>
>
>       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
> following:
>
>
> ! Package textcomp Error: Symbol \textasciigrave not provided by
> (textcomp)                font family zi4 in TS1 encoding.
> (textcomp)                Default family used instead.
>
> See the textcomp package documentation for explanation.
> * checking PDF version of manual without hyperrefs or index ... ERROR
> * DONE
>
>
>       This is using R 3.6.2 under macOS 10.15.3 applied to the current
> development version of "https://github.com/sbgraves237/Ecfun".  Travis
> CI reported that the build passed;  see
> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>
>
>
>       This looks to me like it's complaining about the use of the back
> tick character ("`", below "~" on the top left key on a standard
> American English keyboard), which I assume is equivalent to
> "\textasciigrave" in certain contexts.
>
>
>       Six out of those 8 repetitions occur in the examples sections of
> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
> "subNonStandardNames.Rd". Those functions were written to fix parsing
> errors with names like "Raúl" that had been mangled by different
> software before I could get it into R.
>
>
>       After a day's work failed to produce a work around, I decided to
> ask this group.
>
>
>       What do you suggest?
>       Thanks,
>       Spencer Graves
>
> ______________________________________________
> [hidden email] mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Spencer Graves
Hi, Ken et al.:


       Thanks for the info.  I tried to do what you suggested but still
have the problem.


       Specifically, a web search for TexLive 2020 led me to
"https://tug.org/texlive/".  That invited me to download and install
MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I
did.   Everything seemed to go smoothly, but when I ran "R CMD build
Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This
is running those commands in a Terminal.  When I invoked "r" there just
now and requested "sessionInfo()", I got the following:


R version 4.0.0 (2020-04-24)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.4

Matrix products: default
BLAS:
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
LAPACK:
/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods base

loaded via a namespace (and not attached):
[1] compiler_4.0.0


       Might you have other suggestions?


       Thanks very much for eliminating one possible source of this
problem.


       Spencer Graves


On 2020-05-12 20:12, Ken Beath wrote:

> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>
> Ken
>
>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>
>> Hello, All:
>>
>>
>>        Might "R CMD check" on Mac use obsolete LaTeX software?
>>
>>
>>        I ask, because "R CMD check" on my Mac started reporting LaTeX
>> errors on *.Rd files that previously passed "R CMD check" without
>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>> that.  I did that and got the following:
>>
>>
>>              * "In a current tex system \textasciigrave should work with
>> your families - they don't have the glyph but latex will fall back
>> without error. In older systems it could give an error."
>>
>>
>> See:
>>
>>
>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>
>>
>>        Comments?
>>        Thanks,
>>        Spencer Graves
>>
>>
>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>
>>
>> -------- Forwarded Message --------
>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>> (textcomp)
>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>> From: Spencer Graves<[hidden email]>
>> To: [hidden email]
>>
>>
>>
>> Hello, All:
>>
>>
>>        "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>> following:
>>
>>
>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>> (textcomp)                font family zi4 in TS1 encoding.
>> (textcomp)                Default family used instead.
>>
>> See the textcomp package documentation for explanation.
>> * checking PDF version of manual without hyperrefs or index ... ERROR
>> * DONE
>>
>>
>>        This is using R 3.6.2 under macOS 10.15.3 applied to the current
>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>> CI reported that the build passed;  see
>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>
>>
>>
>>        This looks to me like it's complaining about the use of the back
>> tick character ("`", below "~" on the top left key on a standard
>> American English keyboard), which I assume is equivalent to
>> "\textasciigrave" in certain contexts.
>>
>>
>>        Six out of those 8 repetitions occur in the examples sections of
>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>> errors with names like "Raúl" that had been mangled by different
>> software before I could get it into R.
>>
>>
>>        After a day's work failed to produce a work around, I decided to
>> ask this group.
>>
>>
>>        What do you suggest?
>>        Thanks,
>>        Spencer Graves
>>
>> ______________________________________________
>> [hidden email]  mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>>
>> [[alternative HTML version deleted]]
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> [hidden email]
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>

_______________________________________________
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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

peter dalgaard
You typically need to ensure that you have the right TeX installation in your PATH (and not an older one earlier in the path). You should see something like this

Peters-MacBook-Air:BUILD pd$ which pdflatex
/Library/TeX/texbin/pdflatex
Peters-MacBook-Air:BUILD pd$ pdflatex -version
pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)
kpathsea version 6.3.1
....
Peters-MacBook-Air:BUILD pd$ echo $PATH
/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/Library/TeX/texbin:/opt/X11/bin

(Notice that if I had older TeX stuff in /usr/local, I could be in similar trouble...)

-pd


> On 13 May 2020, at 06:15 , Spencer Graves <[hidden email]> wrote:
>
> Hi, Ken et al.:
>
>
>       Thanks for the info.  I tried to do what you suggested but still have the problem.
>
>
>       Specifically, a web search for TexLive 2020 led me to "https://tug.org/texlive/".  That invited me to download and install MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I did.   Everything seemed to go smoothly, but when I ran "R CMD build Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This is running those commands in a Terminal.  When I invoked "r" there just now and requested "sessionInfo()", I got the following:
>
>
> R version 4.0.0 (2020-04-24)
> Platform: x86_64-apple-darwin17.0 (64-bit)
> Running under: macOS Catalina 10.15.4
>
> Matrix products: default
> BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
> LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods base
>
> loaded via a namespace (and not attached):
> [1] compiler_4.0.0
>
>
>       Might you have other suggestions?
>
>
>       Thanks very much for eliminating one possible source of this problem.
>
>
>       Spencer Graves
>
>
> On 2020-05-12 20:12, Ken Beath wrote:
>> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>>
>> Ken
>>
>>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>>
>>> Hello, All:
>>>
>>>
>>>       Might "R CMD check" on Mac use obsolete LaTeX software?
>>>
>>>
>>>       I ask, because "R CMD check" on my Mac started reporting LaTeX
>>> errors on *.Rd files that previously passed "R CMD check" without
>>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>>> that.  I did that and got the following:
>>>
>>>
>>>             * "In a current tex system \textasciigrave should work with
>>> your families - they don't have the glyph but latex will fall back
>>> without error. In older systems it could give an error."
>>>
>>>
>>> See:
>>>
>>>
>>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>>
>>>
>>>       Comments?
>>>       Thanks,
>>>       Spencer Graves
>>>
>>>
>>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>>
>>>
>>> -------- Forwarded Message --------
>>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>>> (textcomp)
>>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>>> From: Spencer Graves<[hidden email]>
>>> To: [hidden email]
>>>
>>>
>>>
>>> Hello, All:
>>>
>>>
>>>       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>>> following:
>>>
>>>
>>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>>> (textcomp)                font family zi4 in TS1 encoding.
>>> (textcomp)                Default family used instead.
>>>
>>> See the textcomp package documentation for explanation.
>>> * checking PDF version of manual without hyperrefs or index ... ERROR
>>> * DONE
>>>
>>>
>>>       This is using R 3.6.2 under macOS 10.15.3 applied to the current
>>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>>> CI reported that the build passed;  see
>>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>>
>>>
>>>
>>>       This looks to me like it's complaining about the use of the back
>>> tick character ("`", below "~" on the top left key on a standard
>>> American English keyboard), which I assume is equivalent to
>>> "\textasciigrave" in certain contexts.
>>>
>>>
>>>       Six out of those 8 repetitions occur in the examples sections of
>>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>>> errors with names like "Raúl" that had been mangled by different
>>> software before I could get it into R.
>>>
>>>
>>>       After a day's work failed to produce a work around, I decided to
>>> ask this group.
>>>
>>>
>>>       What do you suggest?
>>>       Thanks,
>>>       Spencer Graves
>>>
>>> ______________________________________________
>>> [hidden email]  mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>>>
>>> [[alternative HTML version deleted]]
>>>
>>> _______________________________________________
>>> R-SIG-Mac mailing list
>>> [hidden email]
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: [hidden email]  Priv: [hidden email]

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Spencer Graves
Hi, Peter et al.:


       It looks like you've properly diagnosed my problem.  How do I fix
it?


       "which pdflatex" and "echo $PATH" are as follows:


$ which pdflatex
/usr/local/bin/pdflatex


$ echo $PATH
/Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/sbgraves/anaconda3/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/opt/local/bin:/opt/local/sbin:/Users/sbgraves/anaconda/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/usr/local/git/bin


       I do find "/Library/TeX/texbin/pdflatex" on my hard drive, but
"which pdflatex" doesn't find it.


       Thanks,
       Spencer Graves


On 2020-05-13 01:31, peter dalgaard wrote:

> You typically need to ensure that you have the right TeX installation in your PATH (and not an older one earlier in the path). You should see something like this
>
> Peters-MacBook-Air:BUILD pd$ which pdflatex
> /Library/TeX/texbin/pdflatex
> Peters-MacBook-Air:BUILD pd$ pdflatex -version
> pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)
> kpathsea version 6.3.1
> ....
> Peters-MacBook-Air:BUILD pd$ echo $PATH
> /usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/Library/TeX/texbin:/opt/X11/bin
>
> (Notice that if I had older TeX stuff in /usr/local, I could be in similar trouble...)
>
> -pd
>
>
>> On 13 May 2020, at 06:15 , Spencer Graves <[hidden email]> wrote:
>>
>> Hi, Ken et al.:
>>
>>
>>        Thanks for the info.  I tried to do what you suggested but still have the problem.
>>
>>
>>        Specifically, a web search for TexLive 2020 led me to "https://tug.org/texlive/".  That invited me to download and install MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I did.   Everything seemed to go smoothly, but when I ran "R CMD build Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This is running those commands in a Terminal.  When I invoked "r" there just now and requested "sessionInfo()", I got the following:
>>
>>
>> R version 4.0.0 (2020-04-24)
>> Platform: x86_64-apple-darwin17.0 (64-bit)
>> Running under: macOS Catalina 10.15.4
>>
>> Matrix products: default
>> BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
>> LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>>
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods base
>>
>> loaded via a namespace (and not attached):
>> [1] compiler_4.0.0
>>
>>
>>        Might you have other suggestions?
>>
>>
>>        Thanks very much for eliminating one possible source of this problem.
>>
>>
>>        Spencer Graves
>>
>>
>> On 2020-05-12 20:12, Ken Beath wrote:
>>> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>>>
>>> Ken
>>>
>>>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>>>
>>>> Hello, All:
>>>>
>>>>
>>>>        Might "R CMD check" on Mac use obsolete LaTeX software?
>>>>
>>>>
>>>>        I ask, because "R CMD check" on my Mac started reporting LaTeX
>>>> errors on *.Rd files that previously passed "R CMD check" without
>>>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>>>> that.  I did that and got the following:
>>>>
>>>>
>>>>              * "In a current tex system \textasciigrave should work with
>>>> your families - they don't have the glyph but latex will fall back
>>>> without error. In older systems it could give an error."
>>>>
>>>>
>>>> See:
>>>>
>>>>
>>>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>>>
>>>>
>>>>        Comments?
>>>>        Thanks,
>>>>        Spencer Graves
>>>>
>>>>
>>>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>>>
>>>>
>>>> -------- Forwarded Message --------
>>>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>>>> (textcomp)
>>>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>>>> From: Spencer Graves<[hidden email]>
>>>> To: [hidden email]
>>>>
>>>>
>>>>
>>>> Hello, All:
>>>>
>>>>
>>>>        "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>>>> following:
>>>>
>>>>
>>>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>>>> (textcomp)                font family zi4 in TS1 encoding.
>>>> (textcomp)                Default family used instead.
>>>>
>>>> See the textcomp package documentation for explanation.
>>>> * checking PDF version of manual without hyperrefs or index ... ERROR
>>>> * DONE
>>>>
>>>>
>>>>        This is using R 3.6.2 under macOS 10.15.3 applied to the current
>>>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>>>> CI reported that the build passed;  see
>>>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>>>
>>>>
>>>>
>>>>        This looks to me like it's complaining about the use of the back
>>>> tick character ("`", below "~" on the top left key on a standard
>>>> American English keyboard), which I assume is equivalent to
>>>> "\textasciigrave" in certain contexts.
>>>>
>>>>
>>>>        Six out of those 8 repetitions occur in the examples sections of
>>>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>>>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>>>> errors with names like "Raúl" that had been mangled by different
>>>> software before I could get it into R.
>>>>
>>>>
>>>>        After a day's work failed to produce a work around, I decided to
>>>> ask this group.
>>>>
>>>>
>>>>        What do you suggest?
>>>>        Thanks,
>>>>        Spencer Graves
>>>>
>>>> ______________________________________________
>>>> [hidden email]  mailing list
>>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>>>>
>>>> [[alternative HTML version deleted]]
>>>>
>>>> _______________________________________________
>>>> R-SIG-Mac mailing list
>>>> [hidden email]
>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> [hidden email]
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Dr Eberhard W Lisse
realpath $(which pdflatex)
pdflatex --version


On 13/05/2020 13:00, Spencer Graves wrote:

> Hi, Peter et al.:
>
>
>       It looks like you've properly diagnosed my problem.  How do I fix it?
>
>
>       "which pdflatex" and "echo $PATH" are as follows:
>
>
> $ which pdflatex
> /usr/local/bin/pdflatex
>
>
> $ echo $PATH
> /Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/sbgraves/anaconda3/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/opt/local/bin:/opt/local/sbin:/Users/sbgraves/anaconda/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/usr/local/git/bin
>
>
>       I do find "/Library/TeX/texbin/pdflatex" on my hard drive, but "which pdflatex" doesn't find it.
>
>
>       Thanks,
>       Spencer Graves
> [...]

--
Dr. Eberhard W. Lisse   \         /       Obstetrician & Gynaecologist
[hidden email]             / *      |  Telephone: +264 81 124 6733 (cell)
PO Box 8421 Bachbrecht  \      /  If this email is signed with GPG/PGP
10007, Namibia           ;____/ Sect 20 of Act No. 4 of 2019 may apply

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Berend Hasselman
In reply to this post by Spencer Graves


> On 13 May 2020, at 13:00, Spencer Graves <[hidden email]> wrote:
>
> Hi, Peter et al.:
>
>
>       It looks like you've properly diagnosed my problem.  How do I fix it?
>
>
>       "which pdflatex" and "echo $PATH" are as follows:
>
>
> $ which pdflatex
> /usr/local/bin/pdflatex
>
>
> $ echo $PATH
> /Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/sbgraves/anaconda3/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/opt/local/bin:/opt/local/sbin:/Users/sbgraves/anaconda/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/usr/local/git/bin
>
>
>       I do find "/Library/TeX/texbin/pdflatex" on my hard drive, but "which pdflatex" doesn't find it.
>
>

Try which -a pdflatex  since your PATH does contain Library/TeX/texbin/.

Berend Hasselman

>       Thanks,
>       Spencer Graves
>
>
> On 2020-05-13 01:31, peter dalgaard wrote:
>> You typically need to ensure that you have the right TeX installation in your PATH (and not an older one earlier in the path). You should see something like this
>>
>> Peters-MacBook-Air:BUILD pd$ which pdflatex
>> /Library/TeX/texbin/pdflatex
>> Peters-MacBook-Air:BUILD pd$ pdflatex -version
>> pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)
>> kpathsea version 6.3.1
>> ....
>> Peters-MacBook-Air:BUILD pd$ echo $PATH
>> /usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/Library/TeX/texbin:/opt/X11/bin
>>
>> (Notice that if I had older TeX stuff in /usr/local, I could be in similar trouble...)
>>
>> -pd
>>
>>
>>> On 13 May 2020, at 06:15 , Spencer Graves <[hidden email]> wrote:
>>>
>>> Hi, Ken et al.:
>>>
>>>
>>>       Thanks for the info.  I tried to do what you suggested but still have the problem.
>>>
>>>
>>>       Specifically, a web search for TexLive 2020 led me to "https://tug.org/texlive/".  That invited me to download and install MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I did.   Everything seemed to go smoothly, but when I ran "R CMD build Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This is running those commands in a Terminal.  When I invoked "r" there just now and requested "sessionInfo()", I got the following:
>>>
>>>
>>> R version 4.0.0 (2020-04-24)
>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>> Running under: macOS Catalina 10.15.4
>>>
>>> Matrix products: default
>>> BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
>>> LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>>>
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>>
>>> attached base packages:
>>> [1] stats     graphics  grDevices utils     datasets  methods base
>>>
>>> loaded via a namespace (and not attached):
>>> [1] compiler_4.0.0
>>>
>>>
>>>       Might you have other suggestions?
>>>
>>>
>>>       Thanks very much for eliminating one possible source of this problem.
>>>
>>>
>>>       Spencer Graves
>>>
>>>
>>> On 2020-05-12 20:12, Ken Beath wrote:
>>>> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>>>>
>>>> Ken
>>>>
>>>>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>>>>
>>>>> Hello, All:
>>>>>
>>>>>
>>>>>       Might "R CMD check" on Mac use obsolete LaTeX software?
>>>>>
>>>>>
>>>>>       I ask, because "R CMD check" on my Mac started reporting LaTeX
>>>>> errors on *.Rd files that previously passed "R CMD check" without
>>>>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>>>>> that.  I did that and got the following:
>>>>>
>>>>>
>>>>>             * "In a current tex system \textasciigrave should work with
>>>>> your families - they don't have the glyph but latex will fall back
>>>>> without error. In older systems it could give an error."
>>>>>
>>>>>
>>>>> See:
>>>>>
>>>>>
>>>>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>>>>
>>>>>
>>>>>       Comments?
>>>>>       Thanks,
>>>>>       Spencer Graves
>>>>>
>>>>>
>>>>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>>>>
>>>>>
>>>>> -------- Forwarded Message --------
>>>>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>>>>> (textcomp)
>>>>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>>>>> From: Spencer Graves<[hidden email]>
>>>>> To: [hidden email]
>>>>>
>>>>>
>>>>>
>>>>> Hello, All:
>>>>>
>>>>>
>>>>>       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>>>>> following:
>>>>>
>>>>>
>>>>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>>>>> (textcomp)                font family zi4 in TS1 encoding.
>>>>> (textcomp)                Default family used instead.
>>>>>
>>>>> See the textcomp package documentation for explanation.
>>>>> * checking PDF version of manual without hyperrefs or index ... ERROR
>>>>> * DONE
>>>>>
>>>>>
>>>>>       This is using R 3.6.2 under macOS 10.15.3 applied to the current
>>>>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>>>>> CI reported that the build passed;  see
>>>>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>>>>
>>>>>
>>>>>
>>>>>       This looks to me like it's complaining about the use of the back
>>>>> tick character ("`", below "~" on the top left key on a standard
>>>>> American English keyboard), which I assume is equivalent to
>>>>> "\textasciigrave" in certain contexts.
>>>>>
>>>>>
>>>>>       Six out of those 8 repetitions occur in the examples sections of
>>>>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>>>>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>>>>> errors with names like "Raúl" that had been mangled by different
>>>>> software before I could get it into R.
>>>>>
>>>>>
>>>>>       After a day's work failed to produce a work around, I decided to
>>>>> ask this group.
>>>>>
>>>>>
>>>>>       What do you suggest?
>>>>>       Thanks,
>>>>>       Spencer Graves
>>>>>
>>>>> ______________________________________________
>>>>> [hidden email]  mailing list
>>>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>>>>>
>>>>> [[alternative HTML version deleted]]
>>>>>
>>>>> _______________________________________________
>>>>> R-SIG-Mac mailing list
>>>>> [hidden email]
>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>>
>>> _______________________________________________
>>> R-SIG-Mac mailing list
>>> [hidden email]
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

R-SIG-Mac mailing list
In reply to this post by Spencer Graves
Spencer,

FWIW, this may be a situation where you need to remove your current/older installations of TeXLive and start fresh with a clean install of TeXLive 2020. It is possible that there is some conflict or corruption of the current multiple installations.

That 'which pdflatex' is pointing directly to an executable in /usr/local/bin, rather than to a symlink in the TeXLive tree, suggests that there is something amiss with your installation.

There are two primary folder trees that would need to be removed:

  /Library/TeX

and

  /usr/local/texlive

The former path will show in Finder, but the latter will not, unless you have hidden folders set to show. If not, then you can use the Finder menu option:

  Go -> Go to Folder

and enter:

  /usr/local

That will then show you the texlive folder, which you can then right click on and delete.

Both folder trees will require your Admin password to delete.

Once you do this, if you elect to do so, you will then need to re-install TeXLive 2020 and hopefully start fresh.

Regards,

Marc Schwartz


> On May 13, 2020, at 7:00 AM, Spencer Graves <[hidden email]> wrote:
>
> Hi, Peter et al.:
>
>
>       It looks like you've properly diagnosed my problem.  How do I fix it?
>
>
>       "which pdflatex" and "echo $PATH" are as follows:
>
>
> $ which pdflatex
> /usr/local/bin/pdflatex
>
>
> $ echo $PATH
> /Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/sbgraves/anaconda3/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/opt/local/bin:/opt/local/sbin:/Users/sbgraves/anaconda/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/usr/local/git/bin
>
>
>       I do find "/Library/TeX/texbin/pdflatex" on my hard drive, but "which pdflatex" doesn't find it.
>
>
>       Thanks,
>       Spencer Graves
>
>
> On 2020-05-13 01:31, peter dalgaard wrote:
>> You typically need to ensure that you have the right TeX installation in your PATH (and not an older one earlier in the path). You should see something like this
>>
>> Peters-MacBook-Air:BUILD pd$ which pdflatex
>> /Library/TeX/texbin/pdflatex
>> Peters-MacBook-Air:BUILD pd$ pdflatex -version
>> pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)
>> kpathsea version 6.3.1
>> ....
>> Peters-MacBook-Air:BUILD pd$ echo $PATH
>> /usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/Library/TeX/texbin:/opt/X11/bin
>>
>> (Notice that if I had older TeX stuff in /usr/local, I could be in similar trouble...)
>>
>> -pd
>>
>>
>>> On 13 May 2020, at 06:15 , Spencer Graves <[hidden email]> wrote:
>>>
>>> Hi, Ken et al.:
>>>
>>>
>>>       Thanks for the info.  I tried to do what you suggested but still have the problem.
>>>
>>>
>>>       Specifically, a web search for TexLive 2020 led me to "https://tug.org/texlive/".  That invited me to download and install MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I did.   Everything seemed to go smoothly, but when I ran "R CMD build Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This is running those commands in a Terminal.  When I invoked "r" there just now and requested "sessionInfo()", I got the following:
>>>
>>>
>>> R version 4.0.0 (2020-04-24)
>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>> Running under: macOS Catalina 10.15.4
>>>
>>> Matrix products: default
>>> BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
>>> LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>>>
>>> locale:
>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>>
>>> attached base packages:
>>> [1] stats     graphics  grDevices utils     datasets  methods base
>>>
>>> loaded via a namespace (and not attached):
>>> [1] compiler_4.0.0
>>>
>>>
>>>       Might you have other suggestions?
>>>
>>>
>>>       Thanks very much for eliminating one possible source of this problem.
>>>
>>>
>>>       Spencer Graves
>>>
>>>
>>> On 2020-05-12 20:12, Ken Beath wrote:
>>>> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>>>>
>>>> Ken
>>>>
>>>>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>>>>
>>>>> Hello, All:
>>>>>
>>>>>
>>>>>       Might "R CMD check" on Mac use obsolete LaTeX software?
>>>>>
>>>>>
>>>>>       I ask, because "R CMD check" on my Mac started reporting LaTeX
>>>>> errors on *.Rd files that previously passed "R CMD check" without
>>>>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>>>>> that.  I did that and got the following:
>>>>>
>>>>>
>>>>>             * "In a current tex system \textasciigrave should work with
>>>>> your families - they don't have the glyph but latex will fall back
>>>>> without error. In older systems it could give an error."
>>>>>
>>>>>
>>>>> See:
>>>>>
>>>>>
>>>>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>>>>
>>>>>
>>>>>       Comments?
>>>>>       Thanks,
>>>>>       Spencer Graves
>>>>>
>>>>>
>>>>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>>>>
>>>>>
>>>>> -------- Forwarded Message --------
>>>>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>>>>> (textcomp)
>>>>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>>>>> From: Spencer Graves<[hidden email]>
>>>>> To: [hidden email]
>>>>>
>>>>>
>>>>>
>>>>> Hello, All:
>>>>>
>>>>>
>>>>>       "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>>>>> following:
>>>>>
>>>>>
>>>>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>>>>> (textcomp)                font family zi4 in TS1 encoding.
>>>>> (textcomp)                Default family used instead.
>>>>>
>>>>> See the textcomp package documentation for explanation.
>>>>> * checking PDF version of manual without hyperrefs or index ... ERROR
>>>>> * DONE
>>>>>
>>>>>
>>>>>       This is using R 3.6.2 under macOS 10.15.3 applied to the current
>>>>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>>>>> CI reported that the build passed;  see
>>>>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>>>>
>>>>>
>>>>>
>>>>>       This looks to me like it's complaining about the use of the back
>>>>> tick character ("`", below "~" on the top left key on a standard
>>>>> American English keyboard), which I assume is equivalent to
>>>>> "\textasciigrave" in certain contexts.
>>>>>
>>>>>
>>>>>       Six out of those 8 repetitions occur in the examples sections of
>>>>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>>>>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>>>>> errors with names like "Raúl" that had been mangled by different
>>>>> software before I could get it into R.
>>>>>
>>>>>
>>>>>       After a day's work failed to produce a work around, I decided to
>>>>> ask this group.
>>>>>
>>>>>
>>>>>       What do you suggest?
>>>>>       Thanks,
>>>>>       Spencer Graves

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Dr Eberhard W Lisse
Marc,

this is not necessarily correct, it can be a symlink, hence my suggestion of

        realpath $(which pdflatex)

which will give you the final executable, in my case

        /usr/local/texlive/2020basic/bin/x86_64-darwin/pdftex

But, I agree, this looks like an ancient installation :-0-O


el


On 13/05/2020 14:16, Marc Schwartz via R-SIG-Mac wrote:

> Spencer,
>
> FWIW, this may be a situation where you need to remove your
> current/older installations of TeXLive and start fresh with a clean
> install of TeXLive 2020.  It is possible that there is some conflict
> or corruption of the current multiple installations.
>
> That 'which pdflatex' is pointing directly to an executable in
> /usr/local/bin, rather than to a symlink in the TeXLive tree, suggests
> that there is something amiss with your installation.
>
> There are two primary folder trees that would need to be removed:
>
>   /Library/TeX
>
> and
>
>   /usr/local/texlive
>
> The former path will show in Finder, but the latter will not, unless
> you have hidden folders set to show.  If not, then you can use the
> Finder menu option:
>
>   Go -> Go to Folder
>
> and enter:
>
>   /usr/local
>
> That will then show you the texlive folder, which you can then right
> click on and delete.
>
> Both folder trees will require your Admin password to delete.
>
> Once you do this, if you elect to do so, you will then need to
> re-install TeXLive 2020 and hopefully start fresh.
>
> Regards,
>
> Marc Schwartz

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

peter dalgaard
In reply to this post by R-SIG-Mac mailing list
Hmm, like Eberhard, I'm not too sure this is right.

A look at ls -l /usr/local/bin should be informative though.

I haven't been paying that close attention, but I think the history is that TeX programs used to live in /usr/local/bin, but then Apple did something(?) so now they go to Library/TeX/texbin (and are really links that via several levels of indirection end up somewhere in /usr/local/texlive). However, old installs may still have binaries or links in /usr/local/bin. I would guess that a simple

sudo rm /usr/local/bin/pdflatex

could work (possibly remove some other  *tex programs as well).

-pd

> On 13 May 2020, at 14:16 , Marc Schwartz <[hidden email]> wrote:
>
> Spencer,
>
> FWIW, this may be a situation where you need to remove your current/older installations of TeXLive and start fresh with a clean install of TeXLive 2020. It is possible that there is some conflict or corruption of the current multiple installations.
>
> That 'which pdflatex' is pointing directly to an executable in /usr/local/bin, rather than to a symlink in the TeXLive tree, suggests that there is something amiss with your installation.
>
> There are two primary folder trees that would need to be removed:
>
>  /Library/TeX
>
> and
>
>  /usr/local/texlive
>
> The former path will show in Finder, but the latter will not, unless you have hidden folders set to show. If not, then you can use the Finder menu option:
>
>  Go -> Go to Folder
>
> and enter:
>
>  /usr/local
>
> That will then show you the texlive folder, which you can then right click on and delete.
>
> Both folder trees will require your Admin password to delete.
>
> Once you do this, if you elect to do so, you will then need to re-install TeXLive 2020 and hopefully start fresh.
>
> Regards,
>
> Marc Schwartz
>
>
>> On May 13, 2020, at 7:00 AM, Spencer Graves <[hidden email]> wrote:
>>
>> Hi, Peter et al.:
>>
>>
>>      It looks like you've properly diagnosed my problem.  How do I fix it?
>>
>>
>>      "which pdflatex" and "echo $PATH" are as follows:
>>
>>
>> $ which pdflatex
>> /usr/local/bin/pdflatex
>>
>>
>> $ echo $PATH
>> /Library/Frameworks/Python.framework/Versions/3.7/bin:/Users/sbgraves/anaconda3/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/opt/local/bin:/opt/local/sbin:/Users/sbgraves/anaconda/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/usr/local/git/bin
>>
>>
>>      I do find "/Library/TeX/texbin/pdflatex" on my hard drive, but "which pdflatex" doesn't find it.
>>
>>
>>      Thanks,
>>      Spencer Graves
>>
>>
>> On 2020-05-13 01:31, peter dalgaard wrote:
>>> You typically need to ensure that you have the right TeX installation in your PATH (and not an older one earlier in the path). You should see something like this
>>>
>>> Peters-MacBook-Air:BUILD pd$ which pdflatex
>>> /Library/TeX/texbin/pdflatex
>>> Peters-MacBook-Air:BUILD pd$ pdflatex -version
>>> pdfTeX 3.14159265-2.6-1.40.20 (TeX Live 2019)
>>> kpathsea version 6.3.1
>>> ....
>>> Peters-MacBook-Air:BUILD pd$ echo $PATH
>>> /usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/Library/TeX/texbin:/opt/X11/bin
>>>
>>> (Notice that if I had older TeX stuff in /usr/local, I could be in similar trouble...)
>>>
>>> -pd
>>>
>>>
>>>> On 13 May 2020, at 06:15 , Spencer Graves <[hidden email]> wrote:
>>>>
>>>> Hi, Ken et al.:
>>>>
>>>>
>>>>      Thanks for the info.  I tried to do what you suggested but still have the problem.
>>>>
>>>>
>>>>      Specifically, a web search for TexLive 2020 led me to "https://tug.org/texlive/".  That invited me to download and install MacTex 2020 from "https://tug.org/mactex/mactex-download.html", which I did.   Everything seemed to go smoothly, but when I ran "R CMD build Ecfun" and "R CMD check Ecfun_0.2-4.tar.gz", I got the same error.  This is running those commands in a Terminal.  When I invoked "r" there just now and requested "sessionInfo()", I got the following:
>>>>
>>>>
>>>> R version 4.0.0 (2020-04-24)
>>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>>> Running under: macOS Catalina 10.15.4
>>>>
>>>> Matrix products: default
>>>> BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
>>>> LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
>>>>
>>>> locale:
>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>>>
>>>> attached base packages:
>>>> [1] stats     graphics  grDevices utils     datasets  methods base
>>>>
>>>> loaded via a namespace (and not attached):
>>>> [1] compiler_4.0.0
>>>>
>>>>
>>>>      Might you have other suggestions?
>>>>
>>>>
>>>>      Thanks very much for eliminating one possible source of this problem.
>>>>
>>>>
>>>>      Spencer Graves
>>>>
>>>>
>>>> On 2020-05-12 20:12, Ken Beath wrote:
>>>>> Your package passes checks on my machine perfectly. It has R 4.0.0 with RStudio and TexLive 2020 with updates to a week or two ago.
>>>>>
>>>>> Ken
>>>>>
>>>>>> On 13 May 2020, at 8:17 am, Spencer Graves<[hidden email]>  wrote:
>>>>>>
>>>>>> Hello, All:
>>>>>>
>>>>>>
>>>>>>      Might "R CMD check" on Mac use obsolete LaTeX software?
>>>>>>
>>>>>>
>>>>>>      I ask, because "R CMD check" on my Mac started reporting LaTeX
>>>>>> errors on *.Rd files that previously passed "R CMD check" without
>>>>>> problems.  Dirk Eddelbuettel recommended I ask tex.stackexchange about
>>>>>> that.  I did that and got the following:
>>>>>>
>>>>>>
>>>>>>            * "In a current tex system \textasciigrave should work with
>>>>>> your families - they don't have the glyph but latex will fall back
>>>>>> without error. In older systems it could give an error."
>>>>>>
>>>>>>
>>>>>> See:
>>>>>>
>>>>>>
>>>>>> https://tex.stackexchange.com/questions/543783/package-textcomp-error-symbol-textasciigrave-not-provided
>>>>>>
>>>>>>
>>>>>>      Comments?
>>>>>>      Thanks,
>>>>>>      Spencer Graves
>>>>>>
>>>>>>
>>>>>> p.s.  An earlier post on this issue to r-pkg-devel is copied below.
>>>>>>
>>>>>>
>>>>>> -------- Forwarded Message --------
>>>>>> Subject: [R-pkg-devel] Error: Symbol \textasciigrave not provided by
>>>>>> (textcomp)
>>>>>> Date: Sun, 16 Feb 2020 14:21:17 -0600
>>>>>> From: Spencer Graves<[hidden email]>
>>>>>> To: [hidden email]
>>>>>>
>>>>>>
>>>>>>
>>>>>> Hello, All:
>>>>>>
>>>>>>
>>>>>>      "R CMD check Ecfun_0.2-4.tar.gz" ends with 8 repetitions of the
>>>>>> following:
>>>>>>
>>>>>>
>>>>>> ! Package textcomp Error: Symbol \textasciigrave not provided by
>>>>>> (textcomp)                font family zi4 in TS1 encoding.
>>>>>> (textcomp)                Default family used instead.
>>>>>>
>>>>>> See the textcomp package documentation for explanation.
>>>>>> * checking PDF version of manual without hyperrefs or index ... ERROR
>>>>>> * DONE
>>>>>>
>>>>>>
>>>>>>      This is using R 3.6.2 under macOS 10.15.3 applied to the current
>>>>>> development version of"https://github.com/sbgraves237/Ecfun".  Travis
>>>>>> CI reported that the build passed;  see
>>>>>> "https://travis-ci.org/sbgraves237/Ecfun/builds/650505913?utm_medium=notification&utm_source=email".
>>>>>>
>>>>>>
>>>>>>
>>>>>>      This looks to me like it's complaining about the use of the back
>>>>>> tick character ("`", below "~" on the top left key on a standard
>>>>>> American English keyboard), which I assume is equivalent to
>>>>>> "\textasciigrave" in certain contexts.
>>>>>>
>>>>>>
>>>>>>      Six out of those 8 repetitions occur in the examples sections of
>>>>>> files "grepNonStandardCharacters.Rd", "subNonStandardCharacters.Rd", and
>>>>>> "subNonStandardNames.Rd". Those functions were written to fix parsing
>>>>>> errors with names like "Raúl" that had been mangled by different
>>>>>> software before I could get it into R.
>>>>>>
>>>>>>
>>>>>>      After a day's work failed to produce a work around, I decided to
>>>>>> ask this group.
>>>>>>
>>>>>>
>>>>>>      What do you suggest?
>>>>>>      Thanks,
>>>>>>      Spencer Graves
>

--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: [hidden email]  Priv: [hidden email]

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

R-SIG-Mac mailing list
In reply to this post by Dr Eberhard W Lisse
Hi,

I will stand to be corrected, but from what I can tell, 'realpath' is not part of a default macOS installation, and would need to be installed from a third party repo (e.g. homebrew).

There appear to be shell script incantations that would accomplish the same functionality, but in the end, in the absence of these approaches, there is not an easy way, under a standard macOS install, to trace through the layers of symlinks to the target file.

You can also do this manually via the Finder, by right clicking on the symlink and using Show Original to navigate as well.

Also, note that under Catalina, the default shell changed from bash to zsh.

Regards,

Marc


> On May 13, 2020, at 9:00 AM, Dr Eberhard W Lisse <[hidden email]> wrote:
>
> Marc,
>
> this is not necessarily correct, it can be a symlink, hence my suggestion of
>
> realpath $(which pdflatex)
>
> which will give you the final executable, in my case
>
> /usr/local/texlive/2020basic/bin/x86_64-darwin/pdftex
>
> But, I agree, this looks like an ancient installation :-0-O
>
>
> el
>
>
> On 13/05/2020 14:16, Marc Schwartz via R-SIG-Mac wrote:
>> Spencer,
>>
>> FWIW, this may be a situation where you need to remove your
>> current/older installations of TeXLive and start fresh with a clean
>> install of TeXLive 2020.  It is possible that there is some conflict
>> or corruption of the current multiple installations.
>>
>> That 'which pdflatex' is pointing directly to an executable in
>> /usr/local/bin, rather than to a symlink in the TeXLive tree, suggests
>> that there is something amiss with your installation.
>>
>> There are two primary folder trees that would need to be removed:
>>
>>  /Library/TeX
>>
>> and
>>
>>  /usr/local/texlive
>>
>> The former path will show in Finder, but the latter will not, unless
>> you have hidden folders set to show.  If not, then you can use the
>> Finder menu option:
>>
>>  Go -> Go to Folder
>>
>> and enter:
>>
>>  /usr/local
>>
>> That will then show you the texlive folder, which you can then right
>> click on and delete.
>>
>> Both folder trees will require your Admin password to delete.
>>
>> Once you do this, if you elect to do so, you will then need to
>> re-install TeXLive 2020 and hopefully start fresh.
>>
>> Regards,
>>
>> Marc Schwartz
>
> _______________________________________________
> R-SIG-Mac mailing list
> [hidden email]
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Adrian Dușa
In reply to this post by peter dalgaard
Not sure if this helps, but for some reason my TeX Live was not installed in Library/TeX/texbin, but in:

~ % realpath $(which pdflatex)

/usr/local/texlive/2019/bin/x86_64-darwin/pdftex



> On 13 May 2020, at 16:34, peter dalgaard <[hidden email]> wrote:
>
> Hmm, like Eberhard, I'm not too sure this is right.
>
> A look at ls -l /usr/local/bin should be informative though.
>
> I haven't been paying that close attention, but I think the history is that TeX programs used to live in /usr/local/bin, but then Apple did something(?) so now they go to Library/TeX/texbin (and are really links that via several levels of indirection end up somewhere in /usr/local/texlive). However, old installs may still have binaries or links in /usr/local/bin. I would guess that a simple
>
> sudo rm /usr/local/bin/pdflatex
>
> could work (possibly remove some other  *tex programs as well).
>
> -pd



Adrian Dusa
University of Bucharest
Romanian Social Data Archive
Soseaua Panduri nr. 90-92
050663 Bucharest sector 5
Romania
https://adriandusa.eu

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Dr Eberhard W Lisse
In reply to this post by R-SIG-Mac mailing list
Ah, yes,

        brew install coreutils

:-)-O

Existing accounts using bash remain under bash when upgrading to
Catalina. And bash remains available so all bash script will continue
to run :-)-O

el

On 13/05/2020 15:44, Marc Schwartz wrote:

> Hi,
>
> I will stand to be corrected, but from what I can tell, 'realpath' is
> not part of a default macOS installation, and would need to be
> installed from a third party repo (e.g. homebrew).
>
> There appear to be shell script incantations that would accomplish the
> same functionality, but in the end, in the absence of these
> approaches, there is not an easy way, under a standard macOS install,
> to trace through the layers of symlinks to the target file.
>
> You can also do this manually via the Finder, by right clicking on the
> symlink and using Show Original to navigate as well.
>
> Also, note that under Catalina, the default shell changed from bash to
> zsh.
>
> Regards,
>
> Marc

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Dr Eberhard W Lisse
In reply to this post by peter dalgaard
Peter,

as far as I understand this the idea is to make the binaries of whatever
MacTeX you use available in

        /Library/TeX/texbin

so that it survives the (annual) upgrade of MacTeX or a switch from the
Basic to the Big MacTeX or whatever.


I would personally not remove the pdflatex, but find something like
UninstallPKG and then locate MacTeX in there and remove that (all
versions, so all old crud goes away.

If you, like me, use MacTeXBasic you can do something like

        if [ ! -x /usr/local/bin/gawk ]
        then
                brew install gawk
        fi
        tlmgr list --only-installed \
           | gawk '{gsub(/:/, ""); print $2}' \
           > ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt

before uninstalling the old packages, then you install the latest and
greatest MacTeXBasic and run something like

        tlmgr update --self
        tlmgr install $(cat ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt)

and, perhaps

        perl -i -p \
                -e 's+\$SELFAUTOPARENT/+/usr/local/texlive/+' \
                /usr/local/texlive/2020basic/texmf.cnf
        texhash

:-)-O

Nowadays, you can just

        sudo rm -rf /usr/local/texlive/2019basic

and if you use homebrew you might have /usr/local owned by yourself so
you don't need the sudo.

Time Machine is your friend (as I just noticed) :-)-O

el


On 13/05/2020 15:34, peter dalgaard wrote:

> Hmm, like Eberhard, I'm not too sure this is right.
>
> A look at ls -l /usr/local/bin should be informative though.
>
> I haven't been paying that close attention, but I think the history is
> that TeX programs used to live in /usr/local/bin, but then Apple did
> something(?)  so now they go to Library/TeX/texbin (and are really
> links that via several levels of indirection end up somewhere in
> /usr/local/texlive).  However, old installs may still have binaries or
> links in /usr/local/bin.  I would guess that a simple
>
> sudo rm /usr/local/bin/pdflatex
>
> could work (possibly remove some other *tex programs as well).
>
> -pd
[...]


--
Dr. Eberhard W. Lisse   \         /       Obstetrician & Gynaecologist
[hidden email]             / *      |  Telephone: +264 81 124 6733 (cell)
PO Box 8421 Bachbrecht  \      /  If this email is signed with GPG/PGP
10007, Namibia           ;____/ Sect 20 of Act No. 4 of 2019 may apply

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Spencer Graves
       Thank you all for your comments on this.  I'm overwhelmed, not
just with the volume of the discussion, but my own ignorance of the
standard command line protocols.


       After trying some but on all of Eberhard Lisse's and Peter
Dalgaard's suggestions below, the problem disappeard after I executed
"sudo rm /usr/local/bin/pdflatex".  I tested "R CMD check
Ecfun_0.2-4.tar.gz" right before I did that, and the problem was still
there.  It disappeared right after I did that.


       Lisse's "UninstallPKG" might have been more graceful, but I
couldn't find the key to that padlock, so I used something that seems
more like boltcutters instead -- and it worked.


       Thanks again,
       Spencer Graves


On 2020-05-13 09:57, Dr Eberhard W Lisse wrote:
> Peter,
>
> as far as I understand this the idea is to make the binaries of whatever
> MacTeX you use available in
>
> /Library/TeX/texbin


       Finder says this was installed yesterday, presumably when I
installed MacTex.
>
> so that it survives the (annual) upgrade of MacTeX or a switch from the
> Basic to the Big MacTeX or whatever.
>
>
> I would personally not remove the pdflatex, but find something like
> UninstallPKG


       How do I find something like "UninstallPKG"?


> and then locate MacTeX in there and remove that (all
> versions, so all old crud goes away.
>
> If you, like me, use MacTeXBasic you can do something like


       I don't think I'm using MacTexBasic, but I'm not a big LaTeX
user, beyond trying to make RMarkdown work these days (and having used
LaTeX when writing "Functional Data Analysis with R and Matlab with
Ramsay and Hooker over a decade ago).

>
> if [ ! -x /usr/local/bin/gawk ]


       I don't seem to have gawk installed, at least not there, and
"gawk" at a Terminal prompt returned, "-bash: gawk: command not found".

> then
> brew install gawk


       I did that, and it seemed to work.  It started "Updating
Homebrew..." and ended 'For compilers to find readline you may need to
set:  export LDFLAGS="-L/usr/local/opt/readline/lib";  export
CPPFLAGS="-I/usr/local/opt/readline/include"'.

> fi
> tlmgr list --only-installed \
>   | gawk '{gsub(/:/, ""); print $2}' \
>   > ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt


       I tried that.  It executed quickly with no output.
>
> before uninstalling the old packages,


       I don't know what to uninstall nor how to do it nor how to even
find what I should uninstall, other than ask here (or maybe at
tex.stackexchange, as Dirk Eddelbuettel had suggested).


> then you install the latest and
> greatest MacTeXBasic


       I installed MacTex yesterday, as I indicated earlier in this
thread.  That may not be enough, but I will skip that for the moment.


> and run something like
>
> tlmgr update --self


       I did this in /Library/TeX/texbin as follows:


texbin sbgraves$ tlmgr update --self

tlmgr: Local TeX Live (2019) is older than remote repository (2020).
Cross release updates are only supported with
   update-tlmgr-latest(.sh/.exe) --update
See https://tug.org/texlive/upgrade.html for details.


       That link starts with, "By default, please get the new TL by
doing a new installation instead of proceeding here."  Clicking "here"
took me to where I was yesterday, when I installed MacTex-2020, which
seems to have gone into "/user/local/texlive/2020".  I also found under
"/user/local/texlive" subdirectories for 2014, and 2016 but not 2019.


> tlmgr install $(cat ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt)


       This gave me the same message as "tlmgr update --self".
>
> and, perhaps
>
> perl -i -p \
> -e 's+\$SELFAUTOPARENT/+/usr/local/texlive/+' \
> /usr/local/texlive/2020basic/texmf.cnf
> texhash


       I have "/user/local/texlive/2020" but not "2020basic", as I
indicated above.  I think I'll skip this for the moment.

>
> :-)-O
>
> Nowadays, you can just
>
> sudo rm -rf /usr/local/texlive/2019basic
>
> and if you use homebrew you might have /usr/local owned by yourself so
> you don't need the sudo.
>
> Time Machine is your friend (as I just noticed) :-)-O
>
> el
>
>
> On 13/05/2020 15:34, peter dalgaard wrote:
>> Hmm, like Eberhard, I'm not too sure this is right.
>>
>> A look at ls -l /usr/local/bin should be informative though.


ls -l /usr/local/bin
total 460456
lrwxr-xr-x  1 root      wheel        66 Nov 26  2018 2to3 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/2to3
lrwxr-xr-x  1 sbgraves  wheel        70 Jun  8  2016 2to3-3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/2to3-3.5
lrwxr-xr-x  1 root      wheel        70 Nov 26  2018 2to3-3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/2to3-3.7
lrwxr-xr-x  1 root      admin        47 Apr 29 15:52 R ->
/Library/Frameworks/R.framework/Resources/bin/R
lrwxr-xr-x  1 root      admin        53 Apr 29 15:52 Rscript ->
/Library/Frameworks/R.framework/Resources/bin/Rscript
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 a2ping ->
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lrwxr-xr-x  1 sbgraves  admin        44 Jan 24  2018 event_rpcgen.py ->
../Cellar/libevent/2.1.8/bin/event_rpcgen.py
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 exceltex ->
/usr/local/texlive/2016/bin/x86_64-darwin/exceltex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 extconv ->
/usr/local/texlive/2016/bin/x86_64-darwin/extconv
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 extractbb ->
/usr/local/texlive/2016/bin/x86_64-darwin/extractbb
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 extractres ->
/usr/local/texlive/2016/bin/x86_64-darwin/extractres
lrwxr-xr-x  1 sbgraves  admin        40 Sep  9  2018 fc-cache ->
../Cellar/fontconfig/2.13.1/bin/fc-cache
lrwxr-xr-x  1 sbgraves  admin        38 Sep  9  2018 fc-cat ->
../Cellar/fontconfig/2.13.1/bin/fc-cat
lrwxr-xr-x  1 sbgraves  admin        43 Sep  9  2018 fc-conflist ->
../Cellar/fontconfig/2.13.1/bin/fc-conflist
lrwxr-xr-x  1 sbgraves  admin        39 Sep  9  2018 fc-list ->
../Cellar/fontconfig/2.13.1/bin/fc-list
lrwxr-xr-x  1 sbgraves  admin        40 Sep  9  2018 fc-match ->
../Cellar/fontconfig/2.13.1/bin/fc-match
lrwxr-xr-x  1 sbgraves  admin        42 Sep  9  2018 fc-pattern ->
../Cellar/fontconfig/2.13.1/bin/fc-pattern
lrwxr-xr-x  1 sbgraves  admin        40 Sep  9  2018 fc-query ->
../Cellar/fontconfig/2.13.1/bin/fc-query
lrwxr-xr-x  1 sbgraves  admin        39 Sep  9  2018 fc-scan ->
../Cellar/fontconfig/2.13.1/bin/fc-scan
lrwxr-xr-x  1 sbgraves  admin        43 Sep  9  2018 fc-validate ->
../Cellar/fontconfig/2.13.1/bin/fc-validate
lrwxr-xr-x  1 sbgraves  admin        33 Jan  3  2018 ffmpeg ->
../Cellar/ffmpeg/3.1.1/bin/ffmpeg
lrwxr-xr-x  1 sbgraves  admin        34 Jan  3  2018 ffprobe ->
../Cellar/ffmpeg/3.1.1/bin/ffprobe
lrwxr-xr-x  1 sbgraves  admin        35 Jan  3  2018 ffserver ->
../Cellar/ffmpeg/3.1.1/bin/ffserver
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 fig4latex ->
/usr/local/texlive/2016/bin/x86_64-darwin/fig4latex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 findhyph ->
/usr/local/texlive/2016/bin/x86_64-darwin/findhyph
lrwxr-xr-x  1 sbgraves  admin        29 Jul 17  2016 flac ->
../Cellar/flac/1.3.1/bin/flac
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 fmtutil ->
/usr/local/texlive/2016/bin/x86_64-darwin/fmtutil
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 fmtutil-sys ->
/usr/local/texlive/2016/bin/x86_64-darwin/fmtutil-sys
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 fmtutil-user ->
/usr/local/texlive/2016/bin/x86_64-darwin/fmtutil-user
-rwxrwxr-x  1 sbgraves  wheel       311 Apr  1  2016 font2c
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 fontinst ->
/usr/local/texlive/2016/bin/x86_64-darwin/fontinst
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 fragmaster ->
/usr/local/texlive/2016/bin/x86_64-darwin/fragmaster
lrwxr-xr-x  1 sbgraves  admin        44 Sep  9  2018 freetype-config ->
../Cellar/freetype/2.9.1/bin/freetype-config
lrwxr-xr-x  1 sbgraves  admin        35 Sep  9  2018 fribidi ->
../Cellar/fribidi/1.0.5/bin/fribidi
lrwxr-xr-x  1 sbgraves  admin        31 Nov  2  2019 g[ ->
../Cellar/coreutils/8.31/bin/g[
lrwxr-xr-x  1 sbgraves  admin        38 Dec  9  2018 gapplication ->
../Cellar/glib/2.58.1/bin/gapplication
lrwxr-xr-x  1 sbgraves  admin        29 May 13 14:53 gawk ->
../Cellar/gawk/5.1.0/bin/gawk
lrwxr-xr-x  1 sbgraves  admin        35 May 13 14:53 gawk-5.1.0 ->
../Cellar/gawk/5.1.0/bin/gawk-5.1.0
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gb2sum ->
../Cellar/coreutils/8.31/bin/gb2sum
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gbase32 ->
../Cellar/coreutils/8.31/bin/gbase32
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gbase64 ->
../Cellar/coreutils/8.31/bin/gbase64
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 gbasename ->
../Cellar/coreutils/8.31/bin/gbasename
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gbasenc ->
../Cellar/coreutils/8.31/bin/gbasenc
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 gbklatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/gbklatex
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 gbkpdflatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/gbkpdflatex
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gcat ->
../Cellar/coreutils/8.31/bin/gcat
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gchcon ->
../Cellar/coreutils/8.31/bin/gchcon
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gchgrp ->
../Cellar/coreutils/8.31/bin/gchgrp
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gchmod ->
../Cellar/coreutils/8.31/bin/gchmod
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gchown ->
../Cellar/coreutils/8.31/bin/gchown
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gchroot ->
../Cellar/coreutils/8.31/bin/gchroot
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gcksum ->
../Cellar/coreutils/8.31/bin/gcksum
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gcomm ->
../Cellar/coreutils/8.31/bin/gcomm
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gcp ->
../Cellar/coreutils/8.31/bin/gcp
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gcsplit ->
../Cellar/coreutils/8.31/bin/gcsplit
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gcut ->
../Cellar/coreutils/8.31/bin/gcut
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gdate ->
../Cellar/coreutils/8.31/bin/gdate
lrwxr-xr-x  1 sbgraves  admin        33 Sep 18  2018 gdbm_dump ->
../Cellar/gdbm/1.18/bin/gdbm_dump
lrwxr-xr-x  1 sbgraves  admin        33 Sep 18  2018 gdbm_load ->
../Cellar/gdbm/1.18/bin/gdbm_load
lrwxr-xr-x  1 sbgraves  admin        32 Sep 18  2018 gdbmtool ->
../Cellar/gdbm/1.18/bin/gdbmtool
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 gdbus ->
../Cellar/glib/2.58.1/bin/gdbus
lrwxr-xr-x  1 sbgraves  admin        39 Dec  9  2018 gdbus-codegen ->
../Cellar/glib/2.58.1/bin/gdbus-codegen
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gdd ->
../Cellar/coreutils/8.31/bin/gdd
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gdf ->
../Cellar/coreutils/8.31/bin/gdf
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gdir ->
../Cellar/coreutils/8.31/bin/gdir
lrwxr-xr-x  1 sbgraves  admin        39 Nov  2  2019 gdircolors ->
../Cellar/coreutils/8.31/bin/gdircolors
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 gdirname ->
../Cellar/coreutils/8.31/bin/gdirname
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gdu ->
../Cellar/coreutils/8.31/bin/gdu
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gecho ->
../Cellar/coreutils/8.31/bin/gecho
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 genv ->
../Cellar/coreutils/8.31/bin/genv
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 getmapdl ->
/usr/local/texlive/2016/bin/x86_64-darwin/getmapdl
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 gettext ->
../Cellar/gettext/0.20.2_1/bin/gettext
lrwxr-xr-x  1 sbgraves  admin        41 May 13 14:53 gettext.sh ->
../Cellar/gettext/0.20.2_1/bin/gettext.sh
lrwxr-xr-x  1 sbgraves  admin        41 May 13 14:53 gettextize ->
../Cellar/gettext/0.20.2_1/bin/gettextize
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gexpand ->
../Cellar/coreutils/8.31/bin/gexpand
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gexpr ->
../Cellar/coreutils/8.31/bin/gexpr
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gfactor ->
../Cellar/coreutils/8.31/bin/gfactor
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gfalse ->
../Cellar/coreutils/8.31/bin/gfalse
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gfmt ->
../Cellar/coreutils/8.31/bin/gfmt
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gfold ->
../Cellar/coreutils/8.31/bin/gfold
lrwxr-xr-x  1 sbgraves  wheel        12 Nov 25  2013 gfortran ->
gfortran-4.8
lrwxr-xr-x  1 sbgraves  wheel        34 Nov 25  2013 gfortran-4.8 ->
x86_64-apple-darwin13.0.0-gfortran
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 gftodvi ->
/usr/local/texlive/2016/bin/x86_64-darwin/gftodvi
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 gftopk ->
/usr/local/texlive/2016/bin/x86_64-darwin/gftopk
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 gftype ->
/usr/local/texlive/2016/bin/x86_64-darwin/gftype
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 ggroups ->
../Cellar/coreutils/8.31/bin/ggroups
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 ghead ->
../Cellar/coreutils/8.31/bin/ghead
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 ghostid ->
../Cellar/coreutils/8.31/bin/ghostid
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gid ->
../Cellar/coreutils/8.31/bin/gid
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 ginstall ->
../Cellar/coreutils/8.31/bin/ginstall
lrwxr-xr-x  1 sbgraves  admin        29 Dec  9  2018 gio ->
../Cellar/glib/2.58.1/bin/gio
lrwxr-xr-x  1 sbgraves  admin        44 Dec  9  2018 gio-launch-desktop
-> ../Cellar/glib/2.58.1/bin/gio-launch-desktop
lrwxr-xr-x  1 sbgraves  admin        42 Dec  9  2018 gio-querymodules ->
../Cellar/glib/2.58.1/bin/gio-querymodules
lrwxr-xr-x  1 sbgraves  admin        27 Jan  4  2018 git ->
../Cellar/git/2.9.2/bin/git
lrwxr-xr-x  1 sbgraves  admin        50 Jan  4  2018
git-credential-osxkeychain ->
../Cellar/git/2.9.2/bin/git-credential-osxkeychain
lrwxr-xr-x  1 sbgraves  admin        37 Jan  4  2018 git-cvsserver ->
../Cellar/git/2.9.2/bin/git-cvsserver
lrwxr-xr-x  1 sbgraves  admin        71 Oct  2  2015 git-lfs ->
/Applications/GitHub Desktop.app/Contents/Resources/git-lfs/bin/git-lfs
lrwxr-xr-x  1 sbgraves  admin        40 Jan  4  2018 git-receive-pack ->
../Cellar/git/2.9.2/bin/git-receive-pack
lrwxr-xr-x  1 sbgraves  admin        33 Jan  4  2018 git-shell ->
../Cellar/git/2.9.2/bin/git-shell
lrwxr-xr-x  1 sbgraves  admin        35 Jan  4  2018 git-subtree ->
../Cellar/git/2.9.2/bin/git-subtree
lrwxr-xr-x  1 sbgraves  admin        42 Jan  4  2018 git-upload-archive
-> ../Cellar/git/2.9.2/bin/git-upload-archive
lrwxr-xr-x  1 sbgraves  admin        39 Jan  4  2018 git-upload-pack ->
../Cellar/git/2.9.2/bin/git-upload-pack
lrwxr-xr-x  1 sbgraves  admin        58 Oct  2  2015 github ->
/Applications/GitHub Desktop.app/Contents/MacOS/github_cli
lrwxr-xr-x  1 sbgraves  admin        28 Jan  4  2018 gitk ->
../Cellar/git/2.9.2/bin/gitk
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gjoin ->
../Cellar/coreutils/8.31/bin/gjoin
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gkill ->
../Cellar/coreutils/8.31/bin/gkill
lrwxr-xr-x  1 sbgraves  admin        48 Dec  9  2018
glib-compile-resources -> ../Cellar/glib/2.58.1/bin/glib-compile-resources
lrwxr-xr-x  1 sbgraves  admin        46 Dec  9  2018
glib-compile-schemas -> ../Cellar/glib/2.58.1/bin/glib-compile-schemas
lrwxr-xr-x  1 sbgraves  admin        41 Dec  9  2018 glib-genmarshal ->
../Cellar/glib/2.58.1/bin/glib-genmarshal
lrwxr-xr-x  1 sbgraves  admin        41 Dec  9  2018 glib-gettextize ->
../Cellar/glib/2.58.1/bin/glib-gettextize
lrwxr-xr-x  1 sbgraves  admin        38 Dec  9  2018 glib-mkenums ->
../Cellar/glib/2.58.1/bin/glib-mkenums
lrwxr-xr-x  1 sbgraves  admin        38 Jul 17  2016 glibtool ->
../Cellar/libtool/2.4.6_1/bin/glibtool
lrwxr-xr-x  1 sbgraves  admin        41 Jul 17  2016 glibtoolize ->
../Cellar/libtool/2.4.6_1/bin/glibtoolize
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 glink ->
../Cellar/coreutils/8.31/bin/glink
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gln ->
../Cellar/coreutils/8.31/bin/gln
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 glogname ->
../Cellar/coreutils/8.31/bin/glogname
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gls ->
../Cellar/coreutils/8.31/bin/gls
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gmd5sum ->
../Cellar/coreutils/8.31/bin/gmd5sum
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gmkdir ->
../Cellar/coreutils/8.31/bin/gmkdir
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gmkfifo ->
../Cellar/coreutils/8.31/bin/gmkfifo
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gmknod ->
../Cellar/coreutils/8.31/bin/gmknod
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gmktemp ->
../Cellar/coreutils/8.31/bin/gmktemp
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gmv ->
../Cellar/coreutils/8.31/bin/gmv
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gnice ->
../Cellar/coreutils/8.31/bin/gnice
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gnl ->
../Cellar/coreutils/8.31/bin/gnl
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gnohup ->
../Cellar/coreutils/8.31/bin/gnohup
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gnproc ->
../Cellar/coreutils/8.31/bin/gnproc
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gnumfmt ->
../Cellar/coreutils/8.31/bin/gnumfmt
lrwxr-xr-x  1 sbgraves  admin        39 Dec  9  2018 gobject-query ->
../Cellar/glib/2.58.1/bin/gobject-query
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 god ->
../Cellar/coreutils/8.31/bin/god
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gpaste ->
../Cellar/coreutils/8.31/bin/gpaste
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 gpathchk ->
../Cellar/coreutils/8.31/bin/gpathchk
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gpinky ->
../Cellar/coreutils/8.31/bin/gpinky
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gpr ->
../Cellar/coreutils/8.31/bin/gpr
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 gprintenv ->
../Cellar/coreutils/8.31/bin/gprintenv
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gprintf ->
../Cellar/coreutils/8.31/bin/gprintf
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gptx ->
../Cellar/coreutils/8.31/bin/gptx
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gpwd ->
../Cellar/coreutils/8.31/bin/gpwd
lrwxr-xr-x  1 sbgraves  admin        42 Sep  9  2018 gr2fonttest ->
../Cellar/graphite2/1.3.12/bin/gr2fonttest
lrwxr-xr-x  1 sbgraves  admin        32 Jul 18  2016 gradle ->
../Cellar/gradle/2.14/bin/gradle
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 greadlink ->
../Cellar/coreutils/8.31/bin/greadlink
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 grealpath ->
../Cellar/coreutils/8.31/bin/grealpath
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 gregorio ->
/usr/local/texlive/2016/bin/x86_64-darwin/gregorio
lrwxr-xr-x  1 sbgraves  admin        35 Dec  9  2018 gresource ->
../Cellar/glib/2.58.1/bin/gresource
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 grm ->
../Cellar/coreutils/8.31/bin/grm
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 grmdir ->
../Cellar/coreutils/8.31/bin/grmdir
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gruncon ->
../Cellar/coreutils/8.31/bin/gruncon
lrwxr-xr-x  1 root      admin        23 May 12 21:40 gs ->
/usr/local/bin/gs-noX11
-rwxr-xr-x  1 root      wheel  18219728 Mar 10 17:44 gs-X11
-rwxrwxr-x  1 sbgraves  wheel  17088500 May  3  2015 gs-X11-Yosemite
-rwxr-xr-x  1 root      wheel  18144368 Mar 10 17:44 gs-noX11
-rwxrwxr-x  1 sbgraves  wheel  17017608 May  3  2015 gs-noX11-Yosemite
-rwxr-xr-x  1 root      wheel       350 Mar 10 17:41 gsbj
-rwxr-xr-x  1 root      wheel       352 Mar 10 17:41 gsdj
-rwxr-xr-x  1 root      wheel       352 Mar 10 17:41 gsdj500
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gseq ->
../Cellar/coreutils/8.31/bin/gseq
lrwxr-xr-x  1 sbgraves  admin        35 Dec  9  2018 gsettings ->
../Cellar/glib/2.58.1/bin/gsettings
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 gsftopk ->
/usr/local/texlive/2016/bin/x86_64-darwin/gsftopk
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 gsha1sum ->
../Cellar/coreutils/8.31/bin/gsha1sum
lrwxr-xr-x  1 sbgraves  admin        39 Nov  2  2019 gsha224sum ->
../Cellar/coreutils/8.31/bin/gsha224sum
lrwxr-xr-x  1 sbgraves  admin        39 Nov  2  2019 gsha256sum ->
../Cellar/coreutils/8.31/bin/gsha256sum
lrwxr-xr-x  1 sbgraves  admin        39 Nov  2  2019 gsha384sum ->
../Cellar/coreutils/8.31/bin/gsha384sum
lrwxr-xr-x  1 sbgraves  admin        39 Nov  2  2019 gsha512sum ->
../Cellar/coreutils/8.31/bin/gsha512sum
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gshred ->
../Cellar/coreutils/8.31/bin/gshred
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gshuf ->
../Cellar/coreutils/8.31/bin/gshuf
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gsleep ->
../Cellar/coreutils/8.31/bin/gsleep
-rwxr-xr-x  1 root      wheel       353 Mar 10 17:41 gslj
-rwxr-xr-x  1 root      wheel       350 Mar 10 17:41 gslp
-rwxr-xr-x  1 root      wheel       277 Mar 10 17:41 gsnd
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gsort ->
../Cellar/coreutils/8.31/bin/gsort
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gsplit ->
../Cellar/coreutils/8.31/bin/gsplit
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gstat ->
../Cellar/coreutils/8.31/bin/gstat
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gstdbuf ->
../Cellar/coreutils/8.31/bin/gstdbuf
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gstty ->
../Cellar/coreutils/8.31/bin/gstty
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gsum ->
../Cellar/coreutils/8.31/bin/gsum
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gsync ->
../Cellar/coreutils/8.31/bin/gsync
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gtac ->
../Cellar/coreutils/8.31/bin/gtac
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gtail ->
../Cellar/coreutils/8.31/bin/gtail
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gtee ->
../Cellar/coreutils/8.31/bin/gtee
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gtest ->
../Cellar/coreutils/8.31/bin/gtest
lrwxr-xr-x  1 sbgraves  admin        33 Dec  9  2018 gtester ->
../Cellar/glib/2.58.1/bin/gtester
lrwxr-xr-x  1 sbgraves  admin        40 Dec  9  2018 gtester-report ->
../Cellar/glib/2.58.1/bin/gtester-report
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 gtimeout ->
../Cellar/coreutils/8.31/bin/gtimeout
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gtouch ->
../Cellar/coreutils/8.31/bin/gtouch
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gtr ->
../Cellar/coreutils/8.31/bin/gtr
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gtrue ->
../Cellar/coreutils/8.31/bin/gtrue
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 gtruncate ->
../Cellar/coreutils/8.31/bin/gtruncate
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gtsort ->
../Cellar/coreutils/8.31/bin/gtsort
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gtty ->
../Cellar/coreutils/8.31/bin/gtty
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 guname ->
../Cellar/coreutils/8.31/bin/guname
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 gunexpand ->
../Cellar/coreutils/8.31/bin/gunexpand
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 guniq ->
../Cellar/coreutils/8.31/bin/guniq
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gunlink ->
../Cellar/coreutils/8.31/bin/gunlink
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 guptime ->
../Cellar/coreutils/8.31/bin/guptime
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 gusers ->
../Cellar/coreutils/8.31/bin/gusers
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 gvdir ->
../Cellar/coreutils/8.31/bin/gvdir
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 gwc ->
../Cellar/coreutils/8.31/bin/gwc
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gwho ->
../Cellar/coreutils/8.31/bin/gwho
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 gwhoami ->
../Cellar/coreutils/8.31/bin/gwhoami
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 gyes ->
../Cellar/coreutils/8.31/bin/gyes
lrwxr-xr-x  1 sbgraves  admin        48 Dec  9  2018 hb-ot-shape-closure
-> ../Cellar/harfbuzz/2.2.0/bin/hb-ot-shape-closure
lrwxr-xr-x  1 sbgraves  admin        37 Dec  9  2018 hb-shape ->
../Cellar/harfbuzz/2.2.0/bin/hb-shape
lrwxr-xr-x  1 sbgraves  admin        38 Dec  9  2018 hb-subset ->
../Cellar/harfbuzz/2.2.0/bin/hb-subset
lrwxr-xr-x  1 sbgraves  admin        36 Dec  9  2018 hb-view ->
../Cellar/harfbuzz/2.2.0/bin/hb-view
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 hbf2gf ->
/usr/local/texlive/2016/bin/x86_64-darwin/hbf2gf
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 hostid ->
../Cellar/coreutils/8.31/bin/hostid
lrwxr-xr-x  1 sbgraves  admin        44 Jan 13 17:42 ht ->
/usr/local/texlive/2016/bin/x86_64-darwin/ht
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 htcontext ->
/usr/local/texlive/2016/bin/x86_64-darwin/htcontext
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 htlatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/htlatex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 htmex ->
/usr/local/texlive/2016/bin/x86_64-darwin/htmex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 httex ->
/usr/local/texlive/2016/bin/x86_64-darwin/httex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 httexi ->
/usr/local/texlive/2016/bin/x86_64-darwin/httexi
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 htxelatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/htxelatex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 htxetex ->
/usr/local/texlive/2016/bin/x86_64-darwin/htxetex
lrwxr-xr-x  1 root      wheel        67 Nov 26  2018 idle3 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/idle3
lrwxr-xr-x  1 sbgraves  wheel        69 Jun  8  2016 idle3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/idle3.5
lrwxr-xr-x  1 root      wheel        69 Nov 26  2018 idle3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/idle3.7
lrwxr-xr-x  1 sbgraves  admin        35 Jul 17  2016 ifnames ->
../Cellar/autoconf/2.69/bin/ifnames
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 includeres ->
/usr/local/texlive/2016/bin/x86_64-darwin/includeres
lrwxr-xr-x  1 sbgraves  admin        35 Jul 17  2016 indexer ->
../Cellar/sphinx/2.2.10/bin/indexer
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 indextool ->
../Cellar/sphinx/2.2.10/bin/indextool
-rwxr-xr-x  1 root      wheel    422288 Mar 29 16:05 info
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 inimf ->
/usr/local/texlive/2016/bin/x86_64-darwin/inimf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 initex ->
/usr/local/texlive/2016/bin/x86_64-darwin/initex
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 innochecksum ->
../Cellar/mysql/5.7.13/bin/innochecksum
-rwxr-xr-x  1 root      wheel    173744 Mar 29 16:05 install-info
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 installfont-tl ->
/usr/local/texlive/2016/bin/x86_64-darwin/installfont-tl
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 jadetex ->
/usr/local/texlive/2016/bin/x86_64-darwin/jadetex
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 jamo-normalize ->
/usr/local/texlive/2016/bin/x86_64-darwin/jamo-normalize
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 jfmutil ->
/usr/local/texlive/2016/bin/x86_64-darwin/jfmutil
lrwxr-xr-x  1 sbgraves  admin        61 Jan 13 17:42 kanji-config-updmap
-> /usr/local/texlive/2016/bin/x86_64-darwin/kanji-config-updmap
lrwxr-xr-x  1 sbgraves  admin        65 Jan 13 17:42
kanji-config-updmap-sys ->
/usr/local/texlive/2016/bin/x86_64-darwin/kanji-config-updmap-sys
lrwxr-xr-x  1 sbgraves  admin        66 Jan 13 17:42
kanji-config-updmap-user ->
/usr/local/texlive/2016/bin/x86_64-darwin/kanji-config-updmap-user
lrwxr-xr-x  1 sbgraves  admin        63 Jan 13 17:42
kanji-fontmap-creator ->
/usr/local/texlive/2016/bin/x86_64-darwin/kanji-fontmap-creator
-r-xr-xr-x  1 root      wheel       161 Jun 25  2019 kav
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 ketcindy ->
/usr/local/texlive/2016/bin/x86_64-darwin/ketcindy
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 komkindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/komkindex
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 kpseaccess ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpseaccess
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 kpsepath ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsepath
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 kpsereadlink ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsereadlink
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 kpsestat ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsestat
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 kpsetool ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsetool
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 kpsewhere ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsewhere
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 kpsewhich ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsewhich
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 kpsexpand ->
/usr/local/texlive/2016/bin/x86_64-darwin/kpsexpand
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 l3build ->
/usr/local/texlive/2016/bin/x86_64-darwin/l3build
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 lacheck ->
/usr/local/texlive/2016/bin/x86_64-darwin/lacheck
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 lamed ->
/usr/local/texlive/2016/bin/x86_64-darwin/lamed
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 latex ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 latex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex-dev
lrwxr-xr-x  1 sbgraves  admin        55 Jan 13 17:42 latex-git-log ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex-git-log
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 latex-papersize ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex-papersize
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 latex2man ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex2man
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 latex2nemeth ->
/usr/local/texlive/2016/bin/x86_64-darwin/latex2nemeth
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 latexdef ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexdef
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 latexdiff ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexdiff
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 latexdiff-vc ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexdiff-vc
lrwxr-xr-x  1 sbgraves  admin        58 Jan 13 17:42 latexfileversion ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexfileversion
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 latexindent ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexindent
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 latexmk ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexmk
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 latexpand ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexpand
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 latexrevise ->
/usr/local/texlive/2016/bin/x86_64-darwin/latexrevise
lrwxr-xr-x  1 sbgraves  admin        29 Dec  9  2018 ldrdf ->
../Cellar/nasm/2.14/bin/ldrdf
lrwxr-xr-x  1 sbgraves  admin        41 Sep  9  2018 libpng-config ->
../Cellar/libpng/1.6.35/bin/libpng-config
lrwxr-xr-x  1 sbgraves  admin        43 Sep  9  2018 libpng16-config ->
../Cellar/libpng/1.6.35/bin/libpng16-config
lrwxr-xr-x  1 sbgraves  admin        61 Jan 13 17:42 lily-glyph-commands
-> /usr/local/texlive/2016/bin/x86_64-darwin/lily-glyph-commands
lrwxr-xr-x  1 sbgraves  admin        61 Jan 13 17:42 lily-image-commands
-> /usr/local/texlive/2016/bin/x86_64-darwin/lily-image-commands
lrwxr-xr-x  1 sbgraves  admin        59 Jan 13 17:42 lily-rebuild-pdfs
-> /usr/local/texlive/2016/bin/x86_64-darwin/lily-rebuild-pdfs
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 listbib ->
/usr/local/texlive/2016/bin/x86_64-darwin/listbib
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 listings-ext.sh ->
/usr/local/texlive/2016/bin/x86_64-darwin/listings-ext.sh
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 lollipop ->
/usr/local/texlive/2016/bin/x86_64-darwin/lollipop
-rwxr-xr-x  1 root      wheel      5470 Mar 10 17:41 lprsetup.sh
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 ltx2crossrefxml ->
/usr/local/texlive/2016/bin/x86_64-darwin/ltx2crossrefxml
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 ltxfileinfo ->
/usr/local/texlive/2016/bin/x86_64-darwin/ltxfileinfo
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 ltximg ->
/usr/local/texlive/2016/bin/x86_64-darwin/ltximg
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 lua2dox_filter ->
/usr/local/texlive/2016/bin/x86_64-darwin/lua2dox_filter
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 luacsplain ->
/usr/local/texlive/2016/bin/x86_64-darwin/luacsplain
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 luahbtex ->
/usr/local/texlive/2016/bin/x86_64-darwin/luahbtex
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 luajittex ->
/usr/local/texlive/2016/bin/x86_64-darwin/luajittex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 lualatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/lualatex
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 lualatex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/lualatex-dev
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 luaotfload-tool ->
/usr/local/texlive/2016/bin/x86_64-darwin/luaotfload-tool
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 luatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/luatex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 luatools ->
/usr/local/texlive/2016/bin/x86_64-darwin/luatools
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 lwarpmk ->
/usr/local/texlive/2016/bin/x86_64-darwin/lwarpmk
lrwxr-xr-x  1 sbgraves  admin        41 Jul 17  2016 lz4_decompress ->
../Cellar/mysql/5.7.13/bin/lz4_decompress
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 m-tx ->
/usr/local/texlive/2016/bin/x86_64-darwin/m-tx
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 mag ->
/usr/local/texlive/2016/bin/x86_64-darwin/mag
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 make4ht ->
/usr/local/texlive/2016/bin/x86_64-darwin/make4ht
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 makedtx ->
/usr/local/texlive/2016/bin/x86_64-darwin/makedtx
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 makeglossaries ->
/usr/local/texlive/2016/bin/x86_64-darwin/makeglossaries
lrwxr-xr-x  1 sbgraves  admin        61 Jan 13 17:42 makeglossaries-lite
-> /usr/local/texlive/2016/bin/x86_64-darwin/makeglossaries-lite
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 makeindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/makeindex
lrwxr-xr-x  1 root      wheel         8 Apr 29 15:52 makeinfo -> texi2any
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 makejvf ->
/usr/local/texlive/2016/bin/x86_64-darwin/makejvf
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 match_parens ->
/usr/local/texlive/2016/bin/x86_64-darwin/match_parens
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mathspic ->
/usr/local/texlive/2016/bin/x86_64-darwin/mathspic
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 md5sum ->
../Cellar/coreutils/8.31/bin/md5sum
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 mendex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mendex
lrwxr-xr-x  1 sbgraves  admin        33 Jul 17  2016 metaflac ->
../Cellar/flac/1.3.1/bin/metaflac
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 mex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mex
lrwxr-xr-x  1 sbgraves  admin        44 Jan 13 17:42 mf ->
/usr/local/texlive/2016/bin/x86_64-darwin/mf
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mf-nowin ->
/usr/local/texlive/2016/bin/x86_64-darwin/mf-nowin
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 mf2pt1 ->
/usr/local/texlive/2016/bin/x86_64-darwin/mf2pt1
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mflua ->
/usr/local/texlive/2016/bin/x86_64-darwin/mflua
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 mflua-nowin ->
/usr/local/texlive/2016/bin/x86_64-darwin/mflua-nowin
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mfluajit ->
/usr/local/texlive/2016/bin/x86_64-darwin/mfluajit
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 mfluajit-nowin ->
/usr/local/texlive/2016/bin/x86_64-darwin/mfluajit-nowin
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mfplain ->
/usr/local/texlive/2016/bin/x86_64-darwin/mfplain
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 mft ->
/usr/local/texlive/2016/bin/x86_64-darwin/mft
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mk4ht ->
/usr/local/texlive/2016/bin/x86_64-darwin/mk4ht
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 mkgrkindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkgrkindex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mkindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkindex
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 mkjobtexmf ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkjobtexmf
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mkocp ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkocp
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mkofm ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkofm
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mkpic ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkpic
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mkt1font ->
/usr/local/texlive/2016/bin/x86_64-darwin/mkt1font
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mktexfmt ->
/usr/local/texlive/2016/bin/x86_64-darwin/mktexfmt
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mktexlsr ->
/usr/local/texlive/2016/bin/x86_64-darwin/mktexlsr
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mktexmf ->
/usr/local/texlive/2016/bin/x86_64-darwin/mktexmf
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mktexpk ->
/usr/local/texlive/2016/bin/x86_64-darwin/mktexpk
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 mktextfm ->
/usr/local/texlive/2016/bin/x86_64-darwin/mktextfm
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mllatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mllatex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mltex ->
/usr/local/texlive/2016/bin/x86_64-darwin/mltex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mmafm ->
/usr/local/texlive/2016/bin/x86_64-darwin/mmafm
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mmpfb ->
/usr/local/texlive/2016/bin/x86_64-darwin/mmpfb
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 mpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/mpost
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 mptopdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/mptopdf
lrwxr-xr-x  1 sbgraves  admin        40 May 13 14:53 msgattrib ->
../Cellar/gettext/0.20.2_1/bin/msgattrib
lrwxr-xr-x  1 sbgraves  admin        37 May 13 14:53 msgcat ->
../Cellar/gettext/0.20.2_1/bin/msgcat
lrwxr-xr-x  1 sbgraves  admin        37 May 13 14:53 msgcmp ->
../Cellar/gettext/0.20.2_1/bin/msgcmp
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msgcomm ->
../Cellar/gettext/0.20.2_1/bin/msgcomm
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msgconv ->
../Cellar/gettext/0.20.2_1/bin/msgconv
lrwxr-xr-x  1 sbgraves  admin        36 May 13 14:53 msgen ->
../Cellar/gettext/0.20.2_1/bin/msgen
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msgexec ->
../Cellar/gettext/0.20.2_1/bin/msgexec
lrwxr-xr-x  1 sbgraves  admin        40 May 13 14:53 msgfilter ->
../Cellar/gettext/0.20.2_1/bin/msgfilter
lrwxr-xr-x  1 sbgraves  admin        37 May 13 14:53 msgfmt ->
../Cellar/gettext/0.20.2_1/bin/msgfmt
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msggrep ->
../Cellar/gettext/0.20.2_1/bin/msggrep
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msginit ->
../Cellar/gettext/0.20.2_1/bin/msginit
lrwxr-xr-x  1 sbgraves  admin        39 May 13 14:53 msgmerge ->
../Cellar/gettext/0.20.2_1/bin/msgmerge
lrwxr-xr-x  1 sbgraves  admin        39 May 13 14:53 msgunfmt ->
../Cellar/gettext/0.20.2_1/bin/msgunfmt
lrwxr-xr-x  1 sbgraves  admin        38 May 13 14:53 msguniq ->
../Cellar/gettext/0.20.2_1/bin/msguniq
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 msxlint ->
/usr/local/texlive/2016/bin/x86_64-darwin/msxlint
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 mtxrun ->
/usr/local/texlive/2016/bin/x86_64-darwin/mtxrun
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 mtxrunjit ->
/usr/local/texlive/2016/bin/x86_64-darwin/mtxrunjit
lrwxr-xr-x  1 sbgraves  admin        59 Jan 13 17:42 multibibliography
-> /usr/local/texlive/2016/bin/x86_64-darwin/multibibliography
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 musixflx ->
/usr/local/texlive/2016/bin/x86_64-darwin/musixflx
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 musixtex ->
/usr/local/texlive/2016/bin/x86_64-darwin/musixtex
lrwxr-xr-x  1 sbgraves  admin        44 Jul 17  2016 my_print_defaults
-> ../Cellar/mysql/5.7.13/bin/my_print_defaults
lrwxr-xr-x  1 sbgraves  admin        40 Jul 17  2016 myisam_ftdump ->
../Cellar/mysql/5.7.13/bin/myisam_ftdump
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 myisamchk ->
../Cellar/mysql/5.7.13/bin/myisamchk
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 myisamlog ->
../Cellar/mysql/5.7.13/bin/myisamlog
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 myisampack ->
../Cellar/mysql/5.7.13/bin/myisampack
lrwxr-xr-x  1 sbgraves  admin        32 Jul 17  2016 mysql ->
../Cellar/mysql/5.7.13/bin/mysql
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 mysql.server ->
../Cellar/mysql/5.7.13/bin/mysql.server
lrwxr-xr-x  1 sbgraves  admin        44 Jul 17  2016 mysql_client_test
-> ../Cellar/mysql/5.7.13/bin/mysql_client_test
lrwxr-xr-x  1 sbgraves  admin        53 Jul 17  2016
mysql_client_test_embedded ->
../Cellar/mysql/5.7.13/bin/mysql_client_test_embedded
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 mysql_config ->
../Cellar/mysql/5.7.13/bin/mysql_config
lrwxr-xr-x  1 sbgraves  admin        46 Jul 17  2016 mysql_config_editor
-> ../Cellar/mysql/5.7.13/bin/mysql_config_editor
lrwxr-xr-x  1 sbgraves  admin        41 Jul 17  2016 mysql_embedded ->
../Cellar/mysql/5.7.13/bin/mysql_embedded
lrwxr-xr-x  1 sbgraves  admin        43 Jul 17  2016 mysql_install_db ->
../Cellar/mysql/5.7.13/bin/mysql_install_db
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 mysql_plugin ->
../Cellar/mysql/5.7.13/bin/mysql_plugin
lrwxr-xr-x  1 sbgraves  admin        52 Jul 17  2016
mysql_secure_installation ->
../Cellar/mysql/5.7.13/bin/mysql_secure_installation
lrwxr-xr-x  1 sbgraves  admin        46 Jul 17  2016 mysql_ssl_rsa_setup
-> ../Cellar/mysql/5.7.13/bin/mysql_ssl_rsa_setup
lrwxr-xr-x  1 sbgraves  admin        46 Jul 17  2016 mysql_tzinfo_to_sql
-> ../Cellar/mysql/5.7.13/bin/mysql_tzinfo_to_sql
lrwxr-xr-x  1 sbgraves  admin        40 Jul 17  2016 mysql_upgrade ->
../Cellar/mysql/5.7.13/bin/mysql_upgrade
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 mysqladmin ->
../Cellar/mysql/5.7.13/bin/mysqladmin
lrwxr-xr-x  1 sbgraves  admin        38 Jul 17  2016 mysqlbinlog ->
../Cellar/mysql/5.7.13/bin/mysqlbinlog
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 mysqlcheck ->
../Cellar/mysql/5.7.13/bin/mysqlcheck
lrwxr-xr-x  1 sbgraves  admin        33 Jul 17  2016 mysqld ->
../Cellar/mysql/5.7.13/bin/mysqld
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 mysqld_multi ->
../Cellar/mysql/5.7.13/bin/mysqld_multi
lrwxr-xr-x  1 sbgraves  admin        38 Jul 17  2016 mysqld_safe ->
../Cellar/mysql/5.7.13/bin/mysqld_safe
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 mysqldump ->
../Cellar/mysql/5.7.13/bin/mysqldump
lrwxr-xr-x  1 sbgraves  admin        40 Jul 17  2016 mysqldumpslow ->
../Cellar/mysql/5.7.13/bin/mysqldumpslow
lrwxr-xr-x  1 sbgraves  admin        38 Jul 17  2016 mysqlimport ->
../Cellar/mysql/5.7.13/bin/mysqlimport
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 mysqlpump ->
../Cellar/mysql/5.7.13/bin/mysqlpump
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 mysqlshow ->
../Cellar/mysql/5.7.13/bin/mysqlshow
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 mysqlslap ->
../Cellar/mysql/5.7.13/bin/mysqlslap
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 mysqltest ->
../Cellar/mysql/5.7.13/bin/mysqltest
lrwxr-xr-x  1 sbgraves  admin        45 Jul 17  2016 mysqltest_embedded
-> ../Cellar/mysql/5.7.13/bin/mysqltest_embedded
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 mysqlxtest ->
../Cellar/mysql/5.7.13/bin/mysqlxtest
lrwxr-xr-x  1 sbgraves  admin        28 Dec  9  2018 nasm ->
../Cellar/nasm/2.14/bin/nasm
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 ndisasm ->
../Cellar/nasm/2.14/bin/ndisasm
lrwxr-xr-x  1 sbgraves  admin        39 May 13 14:53 ngettext ->
../Cellar/gettext/0.20.2_1/bin/ngettext
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 nproc ->
../Cellar/coreutils/8.31/bin/nproc
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 numfmt ->
../Cellar/coreutils/8.31/bin/numfmt
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 odvicopy ->
/usr/local/texlive/2016/bin/x86_64-darwin/odvicopy
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 odvitype ->
/usr/local/texlive/2016/bin/x86_64-darwin/odvitype
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ofm2opl ->
/usr/local/texlive/2016/bin/x86_64-darwin/ofm2opl
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 omfonts ->
/usr/local/texlive/2016/bin/x86_64-darwin/omfonts
lrwxr-xr-x  1 sbgraves  admin        43 Sep 18  2018 oonideckgen ->
../Cellar/ooniprobe/2.2.0_1/bin/oonideckgen
lrwxr-xr-x  1 sbgraves  admin        41 Sep 18  2018 ooniprobe ->
../Cellar/ooniprobe/2.2.0_1/bin/ooniprobe
lrwxr-xr-x  1 sbgraves  admin        47 Sep 18  2018 ooniprobe-agent ->
../Cellar/ooniprobe/2.2.0_1/bin/ooniprobe-agent
lrwxr-xr-x  1 sbgraves  admin        42 Sep 18  2018 oonireport ->
../Cellar/ooniprobe/2.2.0_1/bin/oonireport
lrwxr-xr-x  1 sbgraves  admin        45 Sep 18  2018 ooniresources ->
../Cellar/ooniprobe/2.2.0_1/bin/ooniresources
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 opl2ofm ->
/usr/local/texlive/2016/bin/x86_64-darwin/opl2ofm
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 ot2kpx ->
/usr/local/texlive/2016/bin/x86_64-darwin/ot2kpx
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 otangle ->
/usr/local/texlive/2016/bin/x86_64-darwin/otangle
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 otfinfo ->
/usr/local/texlive/2016/bin/x86_64-darwin/otfinfo
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 otftotfm ->
/usr/local/texlive/2016/bin/x86_64-darwin/otftotfm
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 otp2ocp ->
/usr/local/texlive/2016/bin/x86_64-darwin/otp2ocp
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 outocp ->
/usr/local/texlive/2016/bin/x86_64-darwin/outocp
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ovf2ovp ->
/usr/local/texlive/2016/bin/x86_64-darwin/ovf2ovp
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ovp2ovf ->
/usr/local/texlive/2016/bin/x86_64-darwin/ovp2ovf
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 pamphletangler ->
/usr/local/texlive/2016/bin/x86_64-darwin/pamphletangler
-rwxr-xr-x  1 sbgraves  wheel  79013056 Nov  5  2017 pandoc
-rwxr-xr-x  1 sbgraves  wheel  64388348 Nov  5  2017 pandoc-citeproc
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 patgen ->
/usr/local/texlive/2016/bin/x86_64-darwin/patgen
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pbibtex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pbibtex
lrwxr-xr-x  1 sbgraves  admin        35 Jul 17  2016 pcre-config ->
../Cellar/pcre/8.39/bin/pcre-config
lrwxr-xr-x  1 sbgraves  admin        32 Jul 17  2016 pcregrep ->
../Cellar/pcre/8.39/bin/pcregrep
lrwxr-xr-x  1 sbgraves  admin        32 Jul 17  2016 pcretest ->
../Cellar/pcre/8.39/bin/pcretest
-rwxr-xr-x  1 root      wheel       698 Mar 10 17:41 pdf2dsc
-rwxr-xr-x  1 root      wheel       909 Mar 10 17:41 pdf2ps
lrwxr-xr-x  1 sbgraves  admin        59 Jan 13 17:42 pdfannotextractor
-> /usr/local/texlive/2016/bin/x86_64-darwin/pdfannotextractor
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pdfatfi ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfatfi
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdfbook2 ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfbook2
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdfclose ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfclose
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pdfcrop ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfcrop
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 pdfcslatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfcslatex
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 pdfcsplain ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfcsplain
-rwxr-xr-x@ 1 sbgraves  admin   1643551 Jul 10  2014 pdfdetach
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pdfetex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfetex
-rwxr-xr-x@ 1 sbgraves  admin   1643874 Jul 10  2014 pdffonts
-rwxr-xr-x@ 1 sbgraves  admin   1649499 Jul 10  2014 pdfimages
-rwxr-xr-x@ 1 sbgraves  admin   1648969 Jul 10  2014 pdfinfo
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 pdfjadetex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfjadetex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pdfjam ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfjam
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdflatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdflatex
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 pdflatex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdflatex-dev
lrwxr-xr-x  1 sbgraves  admin        58 Jan 13 17:42 pdflatexpicscale ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdflatexpicscale
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pdfmex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfmex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pdfopen ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfopen
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pdftex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdftex
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 pdftex-quiet ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdftex-quiet
-rwxr-xr-x  1 root      wheel      1246 Mar 27 22:19 pdftexi2dvi
-rwxr-xr-x@ 1 sbgraves  admin   2978488 Jul 10  2014 pdftohtml
-rwxr-xr-x@ 1 sbgraves  admin   2902463 Jul 10  2014 pdftopng
-rwxr-xr-x@ 1 sbgraves  admin   2823765 Jul 10  2014 pdftoppm
-rwxr-xr-x@ 1 sbgraves  admin   2876542 Jul 10  2014 pdftops
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdftosrc ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdftosrc
-rwxr-xr-x@ 1 sbgraves  admin   1764114 Jul 10  2014 pdftotext
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 pdfxmltex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfxmltex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pdfxup ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdfxup
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdvitomp ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdvitomp
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pdvitype ->
/usr/local/texlive/2016/bin/x86_64-darwin/pdvitype
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pedigree ->
/usr/local/texlive/2016/bin/x86_64-darwin/pedigree
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 perltex ->
/usr/local/texlive/2016/bin/x86_64-darwin/perltex
lrwxr-xr-x  1 sbgraves  admin        33 Jul 17  2016 perror ->
../Cellar/mysql/5.7.13/bin/perror
-rwxr-xr-x  1 root      wheel       498 Mar 10 17:41 pf2afm
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pfarrei ->
/usr/local/texlive/2016/bin/x86_64-darwin/pfarrei
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pfb2pfa ->
/usr/local/texlive/2016/bin/x86_64-darwin/pfb2pfa
-rwxr-xr-x  1 root      wheel       516 Mar 10 17:41 pfbtopfa
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 pinky ->
../Cellar/coreutils/8.31/bin/pinky
lrwxrwxr-x  1 root      admin        66 Nov 26  2018 pip3 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pip3
lrwxrwxr-x  1 sbgraves  admin        68 Jun  8  2016 pip3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/pip3.5
lrwxrwxr-x  1 root      admin        68 Nov 26  2018 pip3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pip3.7
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 pk2bm ->
/usr/local/texlive/2016/bin/x86_64-darwin/pk2bm
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 pkfix ->
/usr/local/texlive/2016/bin/x86_64-darwin/pkfix
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 pkfix-helper ->
/usr/local/texlive/2016/bin/x86_64-darwin/pkfix-helper
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pktogf ->
/usr/local/texlive/2016/bin/x86_64-darwin/pktogf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pktype ->
/usr/local/texlive/2016/bin/x86_64-darwin/pktype
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 platex ->
/usr/local/texlive/2016/bin/x86_64-darwin/platex
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 platex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/platex-dev
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pltotf ->
/usr/local/texlive/2016/bin/x86_64-darwin/pltotf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pmpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/pmpost
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 pmxab ->
/usr/local/texlive/2016/bin/x86_64-darwin/pmxab
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 pmxchords ->
/usr/local/texlive/2016/bin/x86_64-darwin/pmxchords
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pn2pdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/pn2pdf
lrwxr-xr-x  1 sbgraves  admin        40 Sep  9  2018 png-fix-itxt ->
../Cellar/libpng/1.6.35/bin/png-fix-itxt
lrwxr-xr-x  1 sbgraves  admin        34 Sep  9  2018 pngfix ->
../Cellar/libpng/1.6.35/bin/pngfix
lrwxr-xr-x  1 sbgraves  admin        62 Jul 17  2016 pocketsphinx_batch
-> ../Cellar/cmu-pocketsphinx/HEAD-eef8300/bin/pocketsphinx_batch
lrwxr-xr-x  1 sbgraves  admin        67 Jul 17  2016
pocketsphinx_continuous ->
../Cellar/cmu-pocketsphinx/HEAD-eef8300/bin/pocketsphinx_continuous
lrwxr-xr-x  1 sbgraves  admin        69 Jul 17  2016
pocketsphinx_mdef_convert ->
../Cellar/cmu-pocketsphinx/HEAD-eef8300/bin/pocketsphinx_mdef_convert
-rwxr-xr-x  1 root      wheel     19846 Mar 27 22:19 pod2texi
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 pooltype ->
/usr/local/texlive/2016/bin/x86_64-darwin/pooltype
-rwxr-xr-x  1 root      wheel       404 Mar 10 17:41 pphs
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ppltotf ->
/usr/local/texlive/2016/bin/x86_64-darwin/ppltotf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 prepmx ->
/usr/local/texlive/2016/bin/x86_64-darwin/prepmx
-rwxr-xr-x  1 root      wheel       395 Mar 10 17:41 printafm
-rwxr-xr-x  1 root      wheel       631 Mar 10 17:41 ps2ascii
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 ps2eps ->
/usr/local/texlive/2016/bin/x86_64-darwin/ps2eps
-rwxr-xr-x  1 root      wheel      2752 Mar 10 17:41 ps2epsi
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ps2frag ->
/usr/local/texlive/2016/bin/x86_64-darwin/ps2frag
-rwxr-xr-x  1 root      wheel       272 Mar 10 17:41 ps2pdf
-rwxr-xr-x  1 root      wheel       215 Mar 10 17:41 ps2pdf12
-rwxr-xr-x  1 root      wheel       215 Mar 10 17:41 ps2pdf13
-rwxr-xr-x  1 root      wheel       215 Mar 10 17:41 ps2pdf14
-rwxr-xr-x  1 root      wheel      1078 Mar 10 17:41 ps2pdfwr
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 ps2pk ->
/usr/local/texlive/2016/bin/x86_64-darwin/ps2pk
-rwxr-xr-x  1 root      wheel       647 Mar 10 17:41 ps2ps
-rwxr-xr-x  1 root      wheel       669 Mar 10 17:41 ps2ps2
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 ps4pdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/ps4pdf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 psbook ->
/usr/local/texlive/2016/bin/x86_64-darwin/psbook
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 psjoin ->
/usr/local/texlive/2016/bin/x86_64-darwin/psjoin
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pslatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pslatex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 psnup ->
/usr/local/texlive/2016/bin/x86_64-darwin/psnup
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 psresize ->
/usr/local/texlive/2016/bin/x86_64-darwin/psresize
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 psselect ->
/usr/local/texlive/2016/bin/x86_64-darwin/psselect
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 pst2pdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/pst2pdf
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 pstops ->
/usr/local/texlive/2016/bin/x86_64-darwin/pstops
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 ptex ->
/usr/local/texlive/2016/bin/x86_64-darwin/ptex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 ptex2pdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/ptex2pdf
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ptftopl ->
/usr/local/texlive/2016/bin/x86_64-darwin/ptftopl
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 ptx ->
../Cellar/coreutils/8.31/bin/ptx
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 purifyeps ->
/usr/local/texlive/2016/bin/x86_64-darwin/purifyeps
lrwxr-xr-x  1 root      wheel        68 Nov 26  2018 pydoc3 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pydoc3
lrwxr-xr-x  1 sbgraves  wheel        70 Jun  8  2016 pydoc3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/pydoc3.5
lrwxr-xr-x  1 root      wheel        70 Nov 26  2018 pydoc3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pydoc3.7
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 pygmentex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pygmentex
lrwxr-xr-x  1 root      wheel        69 Nov 26  2018 python3 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3
lrwxr-xr-x  1 root      wheel        72 Nov 26  2018 python3-32 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3-32
lrwxr-xr-x  1 root      wheel        76 Nov 26  2018 python3-config ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3-config
lrwxr-xr-x  1 sbgraves  wheel        71 Jun  8  2016 python3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/python3.5
lrwxr-xr-x  1 sbgraves  wheel        74 Jun  8  2016 python3.5-32 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/python3.5-32
lrwxr-xr-x  1 sbgraves  wheel        78 Jun  8  2016 python3.5-config ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/python3.5-config
lrwxr-xr-x  1 sbgraves  wheel        72 Jun  8  2016 python3.5m ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/python3.5m
lrwxr-xr-x  1 sbgraves  wheel        79 Jun  8  2016 python3.5m-config
->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/python3.5m-config
lrwxr-xr-x  1 root      wheel        71 Nov 26  2018 python3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3.7
lrwxr-xr-x  1 root      wheel        74 Nov 26  2018 python3.7-32 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3.7-32
lrwxr-xr-x  1 root      wheel        78 Nov 26  2018 python3.7-config ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3.7-config
lrwxr-xr-x  1 root      wheel        72 Nov 26  2018 python3.7m ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3.7m
lrwxr-xr-x  1 root      wheel        79 Nov 26  2018 python3.7m-config
->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/python3.7m-config
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 pythontex ->
/usr/local/texlive/2016/bin/x86_64-darwin/pythontex
lrwxr-xr-x  1 root      wheel        68 Nov 26  2018 pyvenv ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pyvenv
lrwxr-xr-x  1 sbgraves  wheel        72 Jun  8  2016 pyvenv-3.5 ->
../../../Library/Frameworks/Python.framework/Versions/3.5/bin/pyvenv-3.5
lrwxr-xr-x  1 root      wheel        72 Nov 26  2018 pyvenv-3.7 ->
../../../Library/Frameworks/Python.framework/Versions/3.7/bin/pyvenv-3.7
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 r-mpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/r-mpost
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 r-pmpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/r-pmpost
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 r-upmpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/r-upmpost
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 rdf2bin ->
../Cellar/nasm/2.14/bin/rdf2bin
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 rdf2com ->
../Cellar/nasm/2.14/bin/rdf2com
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 rdf2ihx ->
../Cellar/nasm/2.14/bin/rdf2ihx
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 rdf2ith ->
../Cellar/nasm/2.14/bin/rdf2ith
lrwxr-xr-x  1 sbgraves  admin        32 Dec  9  2018 rdf2srec ->
../Cellar/nasm/2.14/bin/rdf2srec
lrwxr-xr-x  1 sbgraves  admin        31 Dec  9  2018 rdfdump ->
../Cellar/nasm/2.14/bin/rdfdump
lrwxr-xr-x  1 sbgraves  admin        30 Dec  9  2018 rdflib ->
../Cellar/nasm/2.14/bin/rdflib
lrwxr-xr-x  1 sbgraves  admin        27 Dec  9  2018 rdx ->
../Cellar/nasm/2.14/bin/rdx
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 realpath ->
../Cellar/coreutils/8.31/bin/realpath
lrwxr-xr-x  1 sbgraves  admin        46 May 13 14:53 recode-sr-latin ->
../Cellar/gettext/0.20.2_1/bin/recode-sr-latin
lrwxr-xr-x  1 sbgraves  admin        34 Jul 17  2016 replace ->
../Cellar/mysql/5.7.13/bin/replace
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 repstopdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/repstopdf
lrwxr-xr-x  1 sbgraves  admin        45 Jul 17  2016 resolve_stack_dump
-> ../Cellar/mysql/5.7.13/bin/resolve_stack_dump
lrwxr-xr-x  1 sbgraves  admin        36 Jul 17  2016 resolveip ->
../Cellar/mysql/5.7.13/bin/resolveip
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 rpdfcrop ->
/usr/local/texlive/2016/bin/x86_64-darwin/rpdfcrop
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 rubibtex ->
/usr/local/texlive/2016/bin/x86_64-darwin/rubibtex
lrwxr-xr-x  1 sbgraves  admin        55 Jan 13 17:42 rubikrotation ->
/usr/local/texlive/2016/bin/x86_64-darwin/rubikrotation
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 rumakeindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/rumakeindex
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 runcon ->
../Cellar/coreutils/8.31/bin/runcon
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 rungs ->
/usr/local/texlive/2016/bin/x86_64-darwin/rungs
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 scor2prt ->
/usr/local/texlive/2016/bin/x86_64-darwin/scor2prt
lrwxr-xr-x  1 sbgraves  admin        36 Dec  9  2018 sdl2-config ->
../Cellar/sdl2/2.0.9/bin/sdl2-config
lrwxr-xr-x  1 sbgraves  admin        35 Jul 17  2016 searchd ->
../Cellar/sphinx/2.2.10/bin/searchd
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 sha1sum ->
../Cellar/coreutils/8.31/bin/sha1sum
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 sha224sum ->
../Cellar/coreutils/8.31/bin/sha224sum
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 sha256sum ->
../Cellar/coreutils/8.31/bin/sha256sum
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 sha384sum ->
../Cellar/coreutils/8.31/bin/sha384sum
lrwxr-xr-x  1 sbgraves  admin        38 Nov  2  2019 sha512sum ->
../Cellar/coreutils/8.31/bin/sha512sum
lrwxr-xr-x  1 sbgraves  admin        34 Nov  2  2019 shred ->
../Cellar/coreutils/8.31/bin/shred
lrwxr-xr-x  1 sbgraves  admin        33 Nov  2  2019 shuf ->
../Cellar/coreutils/8.31/bin/shuf
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 simpdftex ->
/usr/local/texlive/2016/bin/x86_64-darwin/simpdftex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 sjisconv ->
/usr/local/texlive/2016/bin/x86_64-darwin/sjisconv
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 sjislatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/sjislatex
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 sjispdflatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/sjispdflatex
lrwxr-xr-x  1 sbgraves  admin        50 Jul 17  2016 sndfile-resample ->
../Cellar/libsamplerate/0.1.8/bin/sndfile-resample
lrwxr-xr-x  1 sbgraves  admin        37 Jul 17  2016 spelldump ->
../Cellar/sphinx/2.2.10/bin/spelldump
lrwxr-xr-x  1 sbgraves  admin        56 Jul 17  2016 sphinx_cepview ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_cepview
lrwxr-xr-x  1 sbgraves  admin        57 Jul 17  2016 sphinx_cont_seg ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_cont_seg
lrwxr-xr-x  1 sbgraves  admin        51 Jul 17  2016 sphinx_fe ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_fe
lrwxr-xr-x  1 sbgraves  admin        57 Jul 17  2016 sphinx_jsgf2fsg ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_jsgf2fsg
lrwxr-xr-x  1 sbgraves  admin        59 Jul 17  2016 sphinx_lm_convert
-> ../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_lm_convert
lrwxr-xr-x  1 sbgraves  admin        56 Jul 17  2016 sphinx_lm_eval ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_lm_eval
lrwxr-xr-x  1 sbgraves  admin        54 Jul 17  2016 sphinx_pitch ->
../Cellar/cmu-sphinxbase/HEAD-ff848fe/bin/sphinx_pitch
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 splitindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/splitindex
-rwxr-xr-x  1 root      wheel     27786 Mar 22  2017 sqlite3_analyzer
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 srcredact ->
/usr/local/texlive/2016/bin/x86_64-darwin/srcredact
lrwxr-xr-x  1 sbgraves  admin        35 Nov  2  2019 stdbuf ->
../Cellar/coreutils/8.31/bin/stdbuf
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 sty2dtx ->
/usr/local/texlive/2016/bin/x86_64-darwin/sty2dtx
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 svn-multi ->
/usr/local/texlive/2016/bin/x86_64-darwin/svn-multi
lrwxr-xr-x  1 sbgraves  admin        30 Jul 17  2016 swig ->
../Cellar/swig/3.0.10/bin/swig
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 synctex ->
/usr/local/texlive/2016/bin/x86_64-darwin/synctex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 t1ascii ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1ascii
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 t1asm ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1asm
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 t1binary ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1binary
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 t1disasm ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1disasm
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 t1dotlessj ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1dotlessj
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 t1lint ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1lint
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 t1mac ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1mac
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 t1rawafm ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1rawafm
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 t1reencode ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1reencode
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 t1testpage ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1testpage
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 t1unmac ->
/usr/local/texlive/2016/bin/x86_64-darwin/t1unmac
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 t4ht ->
/usr/local/texlive/2016/bin/x86_64-darwin/t4ht
lrwxr-xr-x  1 sbgraves  admin        32 Nov  2  2019 tac ->
../Cellar/coreutils/8.31/bin/tac
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 tangle ->
/usr/local/texlive/2016/bin/x86_64-darwin/tangle
-rwxr-xr-x  1 root      wheel     32160 Mar 29 16:10 tclsh8.6
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 teckit_compile ->
/usr/local/texlive/2016/bin/x86_64-darwin/teckit_compile
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 tex ->
/usr/local/texlive/2016/bin/x86_64-darwin/tex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 tex2aspc ->
/usr/local/texlive/2016/bin/x86_64-darwin/tex2aspc
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 tex2xindy ->
/usr/local/texlive/2016/bin/x86_64-darwin/tex2xindy
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 tex4ebook ->
/usr/local/texlive/2016/bin/x86_64-darwin/tex4ebook
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 tex4ht ->
/usr/local/texlive/2016/bin/x86_64-darwin/tex4ht
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 texconfig ->
/usr/local/texlive/2016/bin/x86_64-darwin/texconfig
lrwxr-xr-x  1 sbgraves  admin        58 Jan 13 17:42 texconfig-dialog ->
/usr/local/texlive/2016/bin/x86_64-darwin/texconfig-dialog
lrwxr-xr-x  1 sbgraves  admin        55 Jan 13 17:42 texconfig-sys ->
/usr/local/texlive/2016/bin/x86_64-darwin/texconfig-sys
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 texcount ->
/usr/local/texlive/2016/bin/x86_64-darwin/texcount
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 texdef ->
/usr/local/texlive/2016/bin/x86_64-darwin/texdef
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 texdiff ->
/usr/local/texlive/2016/bin/x86_64-darwin/texdiff
lrwxr-xr-x  1 sbgraves  admin        55 Jan 13 17:42 texdirflatten ->
/usr/local/texlive/2016/bin/x86_64-darwin/texdirflatten
lrwxr-xr-x  1 sbgraves  admin        29 Jul 27  2016 texdist ->
/Library/TeX/.scripts/texdist
lrwxr-xr-x  1 sbgraves  admin        81 Oct 13  2015 texdistmgr ->
/Library/PreferencePanes/TeXDistPrefPane.prefPane/Contents/Executables/texdistmgr
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 texdoc ->
/usr/local/texlive/2016/bin/x86_64-darwin/texdoc
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 texdoctk ->
/usr/local/texlive/2016/bin/x86_64-darwin/texdoctk
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 texexec ->
/usr/local/texlive/2016/bin/x86_64-darwin/texexec
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 texfot ->
/usr/local/texlive/2016/bin/x86_64-darwin/texfot
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 texhash ->
/usr/local/texlive/2016/bin/x86_64-darwin/texhash
-rwxr-xr-x  1 root      wheel     50192 Mar 27 22:19 texi2any
-rwxr-xr-x  1 root      wheel     59828 Mar 27 22:19 texi2dvi
lrwxr-xr-x  1 sbgraves  admin        37 Jan  3  2018 texi2html ->
../Cellar/texi2html/5.0/bin/texi2html
-rwxr-xr-x  1 root      wheel      1246 Mar 27 22:19 texi2pdf
-rwxr-xr-x  1 root      wheel      4002 Mar 27 22:19 texindex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 texindy ->
/usr/local/texlive/2016/bin/x86_64-darwin/texindy
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 texlinks ->
/usr/local/texlive/2016/bin/x86_64-darwin/texlinks
lrwxr-xr-x  1 sbgraves  admin        54 Jan 13 17:42 texliveonfly ->
/usr/local/texlive/2016/bin/x86_64-darwin/texliveonfly
lrwxr-xr-x  1 sbgraves  admin        56 Jan 13 17:42 texloganalyser ->
/usr/local/texlive/2016/bin/x86_64-darwin/texloganalyser
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 texlua ->
/usr/local/texlive/2016/bin/x86_64-darwin/texlua
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 texluac ->
/usr/local/texlive/2016/bin/x86_64-darwin/texluac
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 texluajit ->
/usr/local/texlive/2016/bin/x86_64-darwin/texluajit
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 texluajitc ->
/usr/local/texlive/2016/bin/x86_64-darwin/texluajitc
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 texmfstart ->
/usr/local/texlive/2016/bin/x86_64-darwin/texmfstart
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 texosquery ->
/usr/local/texlive/2016/bin/x86_64-darwin/texosquery
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 texosquery-jre5 ->
/usr/local/texlive/2016/bin/x86_64-darwin/texosquery-jre5
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 texosquery-jre8 ->
/usr/local/texlive/2016/bin/x86_64-darwin/texosquery-jre8
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 texsis ->
/usr/local/texlive/2016/bin/x86_64-darwin/texsis
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 tftopl ->
/usr/local/texlive/2016/bin/x86_64-darwin/tftopl
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 thumbpdf ->
/usr/local/texlive/2016/bin/x86_64-darwin/thumbpdf
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 tie ->
/usr/local/texlive/2016/bin/x86_64-darwin/tie
lrwxr-xr-x  1 sbgraves  admin        36 Nov  2  2019 timeout ->
../Cellar/coreutils/8.31/bin/timeout
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 tlcockpit ->
/usr/local/texlive/2016/bin/x86_64-darwin/tlcockpit
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 tlmgr ->
/usr/local/texlive/2016/bin/x86_64-darwin/tlmgr
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 tlshell ->
/usr/local/texlive/2016/bin/x86_64-darwin/tlshell
lrwxr-xr-x  1 sbgraves  admin        29 Sep 18  2018 tor ->
../Cellar/tor/0.3.4.8/bin/tor
lrwxr-xr-x  1 sbgraves  admin        37 Sep 18  2018 tor-gencert ->
../Cellar/tor/0.3.4.8/bin/tor-gencert
lrwxr-xr-x  1 sbgraves  admin        37 Sep 18  2018 tor-resolve ->
../Cellar/tor/0.3.4.8/bin/tor-resolve
lrwxr-xr-x  1 sbgraves  admin        32 Sep 18  2018 torify ->
../Cellar/tor/0.3.4.8/bin/torify
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 tpic2pdftex ->
/usr/local/texlive/2016/bin/x86_64-darwin/tpic2pdftex
lrwxr-xr-x  1 sbgraves  admin        37 Nov  2  2019 truncate ->
../Cellar/coreutils/8.31/bin/truncate
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ttf2afm ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttf2afm
lrwxr-xr-x  1 sbgraves  admin        55 Jan 13 17:42 ttf2kotexfont ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttf2kotexfont
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 ttf2pk ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttf2pk
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ttf2tfm ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttf2tfm
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 ttfdump ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttfdump
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 ttftotype42 ->
/usr/local/texlive/2016/bin/x86_64-darwin/ttftotype42
lrwxr-xr-x  1 sbgraves  admin        57 Jan 13 17:42 typeoutfileinfo ->
/usr/local/texlive/2016/bin/x86_64-darwin/typeoutfileinfo
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 ulqda ->
/usr/local/texlive/2016/bin/x86_64-darwin/ulqda
-rwxr-xr-x  1 root      wheel      4165 Mar 10 17:41 unix-lpr.sh
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 upbibtex ->
/usr/local/texlive/2016/bin/x86_64-darwin/upbibtex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 updmap ->
/usr/local/texlive/2016/bin/x86_64-darwin/updmap
lrwxr-xr-x  1 sbgraves  admin        52 Jan 13 17:42 updmap-sys ->
/usr/local/texlive/2016/bin/x86_64-darwin/updmap-sys
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 updmap-user ->
/usr/local/texlive/2016/bin/x86_64-darwin/updmap-user
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 updvitomp ->
/usr/local/texlive/2016/bin/x86_64-darwin/updvitomp
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 updvitype ->
/usr/local/texlive/2016/bin/x86_64-darwin/updvitype
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 uplatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/uplatex
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 uplatex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/uplatex-dev
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 upmendex ->
/usr/local/texlive/2016/bin/x86_64-darwin/upmendex
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 upmpost ->
/usr/local/texlive/2016/bin/x86_64-darwin/upmpost
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 uppltotf ->
/usr/local/texlive/2016/bin/x86_64-darwin/uppltotf
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 uptex ->
/usr/local/texlive/2016/bin/x86_64-darwin/uptex
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 uptftopl ->
/usr/local/texlive/2016/bin/x86_64-darwin/uptftopl
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 urlbst ->
/usr/local/texlive/2016/bin/x86_64-darwin/urlbst
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 utf8mex ->
/usr/local/texlive/2016/bin/x86_64-darwin/utf8mex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 vftovp ->
/usr/local/texlive/2016/bin/x86_64-darwin/vftovp
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 vlna ->
/usr/local/texlive/2016/bin/x86_64-darwin/vlna
lrwxr-xr-x  1 sbgraves  admin        45 Jan 13 17:42 vpe ->
/usr/local/texlive/2016/bin/x86_64-darwin/vpe
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 vpl2ovp ->
/usr/local/texlive/2016/bin/x86_64-darwin/vpl2ovp
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 vpl2vpl ->
/usr/local/texlive/2016/bin/x86_64-darwin/vpl2vpl
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 vptovf ->
/usr/local/texlive/2016/bin/x86_64-darwin/vptovf
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 weave ->
/usr/local/texlive/2016/bin/x86_64-darwin/weave
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 webquiz ->
/usr/local/texlive/2016/bin/x86_64-darwin/webquiz
-rwxrwxr-x  1 sbgraves  wheel       286 Apr  1  2016 wftopfa
-rwxr-xr-x  1 root      wheel     40704 Mar 29 16:10 wish8.6
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 wofm2opl ->
/usr/local/texlive/2016/bin/x86_64-darwin/wofm2opl
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 wopl2ofm ->
/usr/local/texlive/2016/bin/x86_64-darwin/wopl2ofm
lrwxr-xr-x  1 sbgraves  admin        39 Jul 17  2016 wordbreaker ->
../Cellar/sphinx/2.2.10/bin/wordbreaker
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 wordcount ->
/usr/local/texlive/2016/bin/x86_64-darwin/wordcount
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 wovf2ovp ->
/usr/local/texlive/2016/bin/x86_64-darwin/wovf2ovp
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 wovp2ovf ->
/usr/local/texlive/2016/bin/x86_64-darwin/wovp2ovf
lrwxr-xr-x  1 sbgraves  admin        29 Jul 16  2016 x264 ->
../Cellar/x264/r2668/bin/x264
lrwxr-xr-x  1 sbgraves  admin        27 Dec  9  2018 x265 ->
../Cellar/x265/2.9/bin/x265
-rwxr-xr-x  1 sbgraves  wheel    942344 Nov 25  2013
x86_64-apple-darwin13.0.0-gfortran
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 xasy ->
/usr/local/texlive/2016/bin/x86_64-darwin/xasy
lrwxr-xr-x  1 sbgraves  admin        46 Jan 13 17:42 xdvi ->
/usr/local/texlive/2016/bin/x86_64-darwin/xdvi
lrwxr-xr-x  1 sbgraves  admin        50 Jan 13 17:42 xdvi-xaw ->
/usr/local/texlive/2016/bin/x86_64-darwin/xdvi-xaw
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 xdvipdfmx ->
/usr/local/texlive/2016/bin/x86_64-darwin/xdvipdfmx
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 xelatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/xelatex
lrwxr-xr-x  1 sbgraves  admin        53 Jan 13 17:42 xelatex-dev ->
/usr/local/texlive/2016/bin/x86_64-darwin/xelatex-dev
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 xetex ->
/usr/local/texlive/2016/bin/x86_64-darwin/xetex
lrwxr-xr-x  1 sbgraves  admin        39 May 13 14:53 xgettext ->
../Cellar/gettext/0.20.2_1/bin/xgettext
lrwxr-xr-x  1 sbgraves  admin        49 Jan 13 17:42 xhlatex ->
/usr/local/texlive/2016/bin/x86_64-darwin/xhlatex
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 xindex ->
/usr/local/texlive/2016/bin/x86_64-darwin/xindex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 xindy ->
/usr/local/texlive/2016/bin/x86_64-darwin/xindy
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 xindy.mem ->
/usr/local/texlive/2016/bin/x86_64-darwin/xindy.mem
lrwxr-xr-x  1 sbgraves  admin        51 Jan 13 17:42 xindy.run ->
/usr/local/texlive/2016/bin/x86_64-darwin/xindy.run
lrwxr-xr-x  1 sbgraves  admin        48 Jan 13 17:42 xmltex ->
/usr/local/texlive/2016/bin/x86_64-darwin/xmltex
lrwxr-xr-x  1 sbgraves  admin        47 Jan 13 17:42 yplan ->
/usr/local/texlive/2016/bin/x86_64-darwin/yplan
lrwxr-xr-x  1 sbgraves  admin        42 Jul 17  2016 zlib_decompress ->
../Cellar/mysql/5.7.13/bin/zlib_decompress

>>
>> I haven't been paying that close attention, but I think the history is
>> that TeX programs used to live in /usr/local/bin, but then Apple did
>> something(?)  so now they go to Library/TeX/texbin (and are really
>> links that via several levels of indirection end up somewhere in
>> /usr/local/texlive).  However, old installs may still have binaries or
>> links in /usr/local/bin.  I would guess that a simple
>>
>> sudo rm /usr/local/bin/pdflatex
>>
>> could work (possibly remove some other *tex programs as well).
>>
>> -pd
> [...]
>
>

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Dr Eberhard W Lisse
Spencer,

If you just google

        https://www.google.com/search?q=uninstallpkg

the first link coming up is the right one.  But see below.


Do you have a ~/Downloads directory?  Did you look in there?


So the removing of /usr/local/bin/pdflatex did not remove the old 2019
version.  Which is why I proposed uninstallPKG to get rid of all the old
crud.

To be honest, I reckon you should run TimeMachine and then re-install
Catalina after reformatting your hard disk, restore your home directory
and then carefully (step by step) install the Xcode Command Lime Tools,
homebrew, MacTeX and R, which will give you a known state.

I like to have a consistent, known state, with only one (the latest if
possible) version of everything and if possible via the Software Update
or a package manager (homebrew).


homebrew has what is called Casks, which installs proper MacApps (often
from the original developers’ site).  I check regularly whether there
are (new) casks for apps I have manually installed which I then install
(overwrite) so a

        brew upgrade
        brew cask upgrade

will sort me out

btw, I just looked and

        brew cask install uninstallpkg

will do the deed nicely.

el

On 2020-05-13 23:31 , Spencer Graves wrote:

>       Thank you all for your comments on this.  I'm overwhelmed, not
> just with the volume of the discussion, but my own ignorance of the
> standard command line protocols.
>
>
>       After trying some but on all of Eberhard Lisse's and Peter
> Dalgaard's suggestions below, the problem disappeard after I executed
> "sudo rm /usr/local/bin/pdflatex".  I tested "R CMD check
> Ecfun_0.2-4.tar.gz" right before I did that, and the problem was still
> there.  It disappeared right after I did that.
>
>
>       Lisse's "UninstallPKG" might have been more graceful, but I
> couldn't find the key to that padlock, so I used something that seems
> more like boltcutters instead -- and it worked.
>
>
>       Thanks again,
>       Spencer Graves
>
>
> On 2020-05-13 09:57, Dr Eberhard W Lisse wrote:
>> Peter,
>>
>> as far as I understand this the idea is to make the binaries of whatever
>> MacTeX you use available in
>>
>>     /Library/TeX/texbin
>
>
>       Finder says this was installed yesterday, presumably when I
> installed MacTex.
>>
>> so that it survives the (annual) upgrade of MacTeX or a switch from the
>> Basic to the Big MacTeX or whatever.
>>
>>
>> I would personally not remove the pdflatex, but find something like
>> UninstallPKG
>
>
>       How do I find something like "UninstallPKG"?
>
>
>> and then locate MacTeX in there and remove that (all
>> versions, so all old crud goes away.
>>
>> If you, like me, use MacTeXBasic you can do something like
>
>
>       I don't think I'm using MacTexBasic, but I'm not a big LaTeX user,
> beyond trying to make RMarkdown work these days (and having used LaTeX
> when writing "Functional Data Analysis with R and Matlab with Ramsay and
> Hooker over a decade ago).
>
>>
>>     if [ ! -x /usr/local/bin/gawk ]
>
>
>       I don't seem to have gawk installed, at least not there, and
> "gawk" at a Terminal prompt returned, "-bash: gawk: command not found".
>
>>     then
>>         brew install gawk
>
>
>       I did that, and it seemed to work.  It started "Updating
> Homebrew..." and ended 'For compilers to find readline you may need to
> set:  export LDFLAGS="-L/usr/local/opt/readline/lib";  export
> CPPFLAGS="-I/usr/local/opt/readline/include"'.
>
>>     fi
>>     tlmgr list --only-installed \
>>        | gawk '{gsub(/:/, ""); print $2}' \
>>        > ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt
>
>
>       I tried that.  It executed quickly with no output.
>>
>> before uninstalling the old packages,
>
>
>       I don't know what to uninstall nor how to do it nor how to even
> find what I should uninstall, other than ask here (or maybe at
> tex.stackexchange, as Dirk Eddelbuettel had suggested).
>
>
>> then you install the latest and
>> greatest MacTeXBasic
>
>
>       I installed MacTex yesterday, as I indicated earlier in this
> thread.  That may not be enough, but I will skip that for the moment.
>
>
>> and run something like
>>
>>     tlmgr update --self
>
>
>       I did this in /Library/TeX/texbin as follows:
>
>
> texbin sbgraves$ tlmgr update --self
>
> tlmgr: Local TeX Live (2019) is older than remote repository (2020).
> Cross release updates are only supported with
>   update-tlmgr-latest(.sh/.exe) --update
> See https://tug.org/texlive/upgrade.html for details.
>
>
>       That link starts with, "By default, please get the new TL by doing
> a new installation instead of proceeding here."  Clicking "here" took me
> to where I was yesterday, when I installed MacTex-2020, which seems to
> have gone into "/user/local/texlive/2020".  I also found under
> "/user/local/texlive" subdirectories for 2014, and 2016 but not 2019.
>
>
>>     tlmgr install $(cat ~/Downloads/texlive.$(date
>> +%Y-%m-%d).installed.txt)
>
>
>       This gave me the same message as "tlmgr update --self".
>>
>> and, perhaps
>>
>>     perl -i -p \
>>         -e 's+\$SELFAUTOPARENT/+/usr/local/texlive/+' \
>>         /usr/local/texlive/2020basic/texmf.cnf
>>     texhash
>
>
>       I have "/user/local/texlive/2020" but not "2020basic", as I
> indicated above.  I think I'll skip this for the moment.
>>
>> :-)-O
>>
>> Nowadays, you can just
>>
>>     sudo rm -rf /usr/local/texlive/2019basic
>>
>> and if you use homebrew you might have /usr/local owned by yourself so
>> you don't need the sudo.
>>
>> Time Machine is your friend (as I just noticed) :-)-O
>>
>> el
>>
>>
>> On 13/05/2020 15:34, peter dalgaard wrote:
>>> Hmm, like Eberhard, I'm not too sure this is right.
>>>
>>> A look at ls -l /usr/local/bin should be informative though.
>
>
> ls -l /usr/local/bin
> total 460456
[...]

>>>
>>> I haven't been paying that close attention, but I think the history is
>>> that TeX programs used to live in /usr/local/bin, but then Apple did
>>> something(?)  so now they go to Library/TeX/texbin (and are really
>>> links that via several levels of indirection end up somewhere in
>>> /usr/local/texlive).  However, old installs may still have binaries or
>>> links in /usr/local/bin.  I would guess that a simple
>>>
>>> sudo rm /usr/local/bin/pdflatex
>>>
>>> could work (possibly remove some other *tex programs as well).
>>>
>>> -pd
[...]

--
Dr. Eberhard W. Lisse   \         /       Obstetrician & Gynaecologist
[hidden email]             / *      |  Telephone: +264 81 124 6733 (cell)
PO Box 8421 Bachbrecht  \      /  If this email is signed with GPG/PGP
10007, Namibia           ;____/ Sect 20 of Act No. 4 of 2019 may apply

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

Spencer Graves
Hi, Eberhard:


       Please excuse:  I've already solved this problem.  "sudo rm
/usr/local/bin/pdflatex" did the trick.


        You may be right that I should reformat my hard drive and
restore from my TimeMachine.  However, that sounds too much like
"do-it-yourself lobotomy" to me.  I don't plan to try that right now.


       Thanks again for your suggestions.
       Spencer


On 2020-05-13 18:16, Dr Eberhard W Lisse wrote:

> Spencer,
>
> If you just google
>
> https://www.google.com/search?q=uninstallpkg
>
> the first link coming up is the right one.  But see below.
>
>
> Do you have a ~/Downloads directory?  Did you look in there?
>
>
> So the removing of /usr/local/bin/pdflatex did not remove the old 2019
> version.  Which is why I proposed uninstallPKG to get rid of all the old
> crud.
>
> To be honest, I reckon you should run TimeMachine and then re-install
> Catalina after reformatting your hard disk, restore your home directory
> and then carefully (step by step) install the Xcode Command Lime Tools,
> homebrew, MacTeX and R, which will give you a known state.
>
> I like to have a consistent, known state, with only one (the latest if
> possible) version of everything and if possible via the Software Update
> or a package manager (homebrew).
>
>
> homebrew has what is called Casks, which installs proper MacApps (often
> from the original developers’ site).  I check regularly whether there
> are (new) casks for apps I have manually installed which I then install
> (overwrite) so a
>
> brew upgrade
> brew cask upgrade
>
> will sort me out
>
> btw, I just looked and
>
> brew cask install uninstallpkg
>
> will do the deed nicely.
>
> el
>
> On 2020-05-13 23:31 , Spencer Graves wrote:
>>        Thank you all for your comments on this.  I'm overwhelmed, not
>> just with the volume of the discussion, but my own ignorance of the
>> standard command line protocols.
>>
>>
>>        After trying some but on all of Eberhard Lisse's and Peter
>> Dalgaard's suggestions below, the problem disappeard after I executed
>> "sudo rm /usr/local/bin/pdflatex".  I tested "R CMD check
>> Ecfun_0.2-4.tar.gz" right before I did that, and the problem was still
>> there.  It disappeared right after I did that.
>>
>>
>>        Lisse's "UninstallPKG" might have been more graceful, but I
>> couldn't find the key to that padlock, so I used something that seems
>> more like boltcutters instead -- and it worked.
>>
>>
>>        Thanks again,
>>        Spencer Graves
>>
>>
>> On 2020-05-13 09:57, Dr Eberhard W Lisse wrote:
>>> Peter,
>>>
>>> as far as I understand this the idea is to make the binaries of whatever
>>> MacTeX you use available in
>>>
>>>      /Library/TeX/texbin
>>
>>        Finder says this was installed yesterday, presumably when I
>> installed MacTex.
>>> so that it survives the (annual) upgrade of MacTeX or a switch from the
>>> Basic to the Big MacTeX or whatever.
>>>
>>>
>>> I would personally not remove the pdflatex, but find something like
>>> UninstallPKG
>>
>>        How do I find something like "UninstallPKG"?
>>
>>
>>> and then locate MacTeX in there and remove that (all
>>> versions, so all old crud goes away.
>>>
>>> If you, like me, use MacTeXBasic you can do something like
>>
>>        I don't think I'm using MacTexBasic, but I'm not a big LaTeX user,
>> beyond trying to make RMarkdown work these days (and having used LaTeX
>> when writing "Functional Data Analysis with R and Matlab with Ramsay and
>> Hooker over a decade ago).
>>
>>>      if [ ! -x /usr/local/bin/gawk ]
>>
>>        I don't seem to have gawk installed, at least not there, and
>> "gawk" at a Terminal prompt returned, "-bash: gawk: command not found".
>>
>>>      then
>>>          brew install gawk
>>
>>        I did that, and it seemed to work.  It started "Updating
>> Homebrew..." and ended 'For compilers to find readline you may need to
>> set:  export LDFLAGS="-L/usr/local/opt/readline/lib";  export
>> CPPFLAGS="-I/usr/local/opt/readline/include"'.
>>
>>>      fi
>>>      tlmgr list --only-installed \
>>>         | gawk '{gsub(/:/, ""); print $2}' \
>>>         > ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt
>>
>>        I tried that.  It executed quickly with no output.
>>> before uninstalling the old packages,
>>
>>        I don't know what to uninstall nor how to do it nor how to even
>> find what I should uninstall, other than ask here (or maybe at
>> tex.stackexchange, as Dirk Eddelbuettel had suggested).
>>
>>
>>> then you install the latest and
>>> greatest MacTeXBasic
>>
>>        I installed MacTex yesterday, as I indicated earlier in this
>> thread.  That may not be enough, but I will skip that for the moment.
>>
>>
>>> and run something like
>>>
>>>      tlmgr update --self
>>
>>        I did this in /Library/TeX/texbin as follows:
>>
>>
>> texbin sbgraves$ tlmgr update --self
>>
>> tlmgr: Local TeX Live (2019) is older than remote repository (2020).
>> Cross release updates are only supported with
>>    update-tlmgr-latest(.sh/.exe) --update
>> See https://tug.org/texlive/upgrade.html for details.
>>
>>
>>        That link starts with, "By default, please get the new TL by doing
>> a new installation instead of proceeding here."  Clicking "here" took me
>> to where I was yesterday, when I installed MacTex-2020, which seems to
>> have gone into "/user/local/texlive/2020".  I also found under
>> "/user/local/texlive" subdirectories for 2014, and 2016 but not 2019.
>>
>>
>>>      tlmgr install $(cat ~/Downloads/texlive.$(date
>>> +%Y-%m-%d).installed.txt)
>>
>>        This gave me the same message as "tlmgr update --self".
>>> and, perhaps
>>>
>>>      perl -i -p \
>>>          -e 's+\$SELFAUTOPARENT/+/usr/local/texlive/+' \
>>>          /usr/local/texlive/2020basic/texmf.cnf
>>>      texhash
>>
>>        I have "/user/local/texlive/2020" but not "2020basic", as I
>> indicated above.  I think I'll skip this for the moment.
>>> :-)-O
>>>
>>> Nowadays, you can just
>>>
>>>      sudo rm -rf /usr/local/texlive/2019basic
>>>
>>> and if you use homebrew you might have /usr/local owned by yourself so
>>> you don't need the sudo.
>>>
>>> Time Machine is your friend (as I just noticed) :-)-O
>>>
>>> el
>>>
>>>
>>> On 13/05/2020 15:34, peter dalgaard wrote:
>>>> Hmm, like Eberhard, I'm not too sure this is right.
>>>>
>>>> A look at ls -l /usr/local/bin should be informative though.
>>
>> ls -l /usr/local/bin
>> total 460456
> [...]
>>>> I haven't been paying that close attention, but I think the history is
>>>> that TeX programs used to live in /usr/local/bin, but then Apple did
>>>> something(?)  so now they go to Library/TeX/texbin (and are really
>>>> links that via several levels of indirection end up somewhere in
>>>> /usr/local/texlive).  However, old installs may still have binaries or
>>>> links in /usr/local/bin.  I would guess that a simple
>>>>
>>>> sudo rm /usr/local/bin/pdflatex
>>>>
>>>> could work (possibly remove some other *tex programs as well).
>>>>
>>>> -pd
> [...]
>

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Re: [R-SIG-Mac] obsolete LaTeX software in "R CMD check" on Mac?

peter dalgaard
Well, you solved the immediate problem. However, you could get in trouble later with other tools from the 2016 TeXlive set, which seems to be what you have lingering.

There doesn't seem to be an uninstaller that removes the symlinks on Mac. So...

Either: (a) remove all links manually plus the entire /usr/local/texlive/2016 tree.
Or: (b) ensure that the current TeXlive stuff is found ahead of /usr/local/bin

(a) is a bit painful when it comes to the symlinks. There are likely around 450 of them. Of course, only a handful are ever used, so once /usr/local/texlive/2016 is gone, you just get a 'not found' type error and can remove the offending link one at a time. It is possible to automate it, but a bit dangerous if you get it wrong... Something like

ls -l /usr/local/bin | grep 'texlive/2016' | awk '{print $9}'

should give you a list. (...which with a bit of diligence, you can have removed in one swoop, but...)

(b) is more expedient (but leaves the mess in /usr/local/bin): edit /etc/paths with, like,

sudo nano /etc/paths

insert /Library/TeX/texbin at the top and save. Then, for good measure

sudo rm /etc/paths.d/TeX

so that it isn't in $PATH twice.


-pd

> On 14 May 2020, at 01:21 , Spencer Graves <[hidden email]> wrote:
>
> Hi, Eberhard:
>
>
>       Please excuse:  I've already solved this problem.  "sudo rm /usr/local/bin/pdflatex" did the trick.
>
>
>        You may be right that I should reformat my hard drive and restore from my TimeMachine.  However, that sounds too much like "do-it-yourself lobotomy" to me.  I don't plan to try that right now.
>
>
>       Thanks again for your suggestions.
>       Spencer
>
>
> On 2020-05-13 18:16, Dr Eberhard W Lisse wrote:
>> Spencer,
>>
>> If you just google
>>
>> https://www.google.com/search?q=uninstallpkg
>>
>> the first link coming up is the right one.  But see below.
>>
>>
>> Do you have a ~/Downloads directory?  Did you look in there?
>>
>>
>> So the removing of /usr/local/bin/pdflatex did not remove the old 2019
>> version.  Which is why I proposed uninstallPKG to get rid of all the old
>> crud.
>>
>> To be honest, I reckon you should run TimeMachine and then re-install
>> Catalina after reformatting your hard disk, restore your home directory
>> and then carefully (step by step) install the Xcode Command Lime Tools,
>> homebrew, MacTeX and R, which will give you a known state.
>>
>> I like to have a consistent, known state, with only one (the latest if
>> possible) version of everything and if possible via the Software Update
>> or a package manager (homebrew).
>>
>>
>> homebrew has what is called Casks, which installs proper MacApps (often
>> from the original developers’ site).  I check regularly whether there
>> are (new) casks for apps I have manually installed which I then install
>> (overwrite) so a
>>
>> brew upgrade
>> brew cask upgrade
>>
>> will sort me out
>>
>> btw, I just looked and
>>
>> brew cask install uninstallpkg
>>
>> will do the deed nicely.
>>
>> el
>>
>> On 2020-05-13 23:31 , Spencer Graves wrote:
>>>       Thank you all for your comments on this.  I'm overwhelmed, not
>>> just with the volume of the discussion, but my own ignorance of the
>>> standard command line protocols.
>>>
>>>
>>>       After trying some but on all of Eberhard Lisse's and Peter
>>> Dalgaard's suggestions below, the problem disappeard after I executed
>>> "sudo rm /usr/local/bin/pdflatex".  I tested "R CMD check
>>> Ecfun_0.2-4.tar.gz" right before I did that, and the problem was still
>>> there.  It disappeared right after I did that.
>>>
>>>
>>>       Lisse's "UninstallPKG" might have been more graceful, but I
>>> couldn't find the key to that padlock, so I used something that seems
>>> more like boltcutters instead -- and it worked.
>>>
>>>
>>>       Thanks again,
>>>       Spencer Graves
>>>
>>>
>>> On 2020-05-13 09:57, Dr Eberhard W Lisse wrote:
>>>> Peter,
>>>>
>>>> as far as I understand this the idea is to make the binaries of whatever
>>>> MacTeX you use available in
>>>>
>>>>     /Library/TeX/texbin
>>>
>>>       Finder says this was installed yesterday, presumably when I
>>> installed MacTex.
>>>> so that it survives the (annual) upgrade of MacTeX or a switch from the
>>>> Basic to the Big MacTeX or whatever.
>>>>
>>>>
>>>> I would personally not remove the pdflatex, but find something like
>>>> UninstallPKG
>>>
>>>       How do I find something like "UninstallPKG"?
>>>
>>>
>>>> and then locate MacTeX in there and remove that (all
>>>> versions, so all old crud goes away.
>>>>
>>>> If you, like me, use MacTeXBasic you can do something like
>>>
>>>       I don't think I'm using MacTexBasic, but I'm not a big LaTeX user,
>>> beyond trying to make RMarkdown work these days (and having used LaTeX
>>> when writing "Functional Data Analysis with R and Matlab with Ramsay and
>>> Hooker over a decade ago).
>>>
>>>>     if [ ! -x /usr/local/bin/gawk ]
>>>
>>>       I don't seem to have gawk installed, at least not there, and
>>> "gawk" at a Terminal prompt returned, "-bash: gawk: command not found".
>>>
>>>>     then
>>>>         brew install gawk
>>>
>>>       I did that, and it seemed to work.  It started "Updating
>>> Homebrew..." and ended 'For compilers to find readline you may need to
>>> set:  export LDFLAGS="-L/usr/local/opt/readline/lib";  export
>>> CPPFLAGS="-I/usr/local/opt/readline/include"'.
>>>
>>>>     fi
>>>>     tlmgr list --only-installed \
>>>>        | gawk '{gsub(/:/, ""); print $2}' \
>>>>        > ~/Downloads/texlive.$(date +%Y-%m-%d).installed.txt
>>>
>>>       I tried that.  It executed quickly with no output.
>>>> before uninstalling the old packages,
>>>
>>>       I don't know what to uninstall nor how to do it nor how to even
>>> find what I should uninstall, other than ask here (or maybe at
>>> tex.stackexchange, as Dirk Eddelbuettel had suggested).
>>>
>>>
>>>> then you install the latest and
>>>> greatest MacTeXBasic
>>>
>>>       I installed MacTex yesterday, as I indicated earlier in this
>>> thread.  That may not be enough, but I will skip that for the moment.
>>>
>>>
>>>> and run something like
>>>>
>>>>     tlmgr update --self
>>>
>>>       I did this in /Library/TeX/texbin as follows:
>>>
>>>
>>> texbin sbgraves$ tlmgr update --self
>>>
>>> tlmgr: Local TeX Live (2019) is older than remote repository (2020).
>>> Cross release updates are only supported with
>>>   update-tlmgr-latest(.sh/.exe) --update
>>> See https://tug.org/texlive/upgrade.html for details.
>>>
>>>
>>>       That link starts with, "By default, please get the new TL by doing
>>> a new installation instead of proceeding here."  Clicking "here" took me
>>> to where I was yesterday, when I installed MacTex-2020, which seems to
>>> have gone into "/user/local/texlive/2020".  I also found under
>>> "/user/local/texlive" subdirectories for 2014, and 2016 but not 2019.
>>>
>>>
>>>>     tlmgr install $(cat ~/Downloads/texlive.$(date
>>>> +%Y-%m-%d).installed.txt)
>>>
>>>       This gave me the same message as "tlmgr update --self".
>>>> and, perhaps
>>>>
>>>>     perl -i -p \
>>>>         -e 's+\$SELFAUTOPARENT/+/usr/local/texlive/+' \
>>>>         /usr/local/texlive/2020basic/texmf.cnf
>>>>     texhash
>>>
>>>       I have "/user/local/texlive/2020" but not "2020basic", as I
>>> indicated above.  I think I'll skip this for the moment.
>>>> :-)-O
>>>>
>>>> Nowadays, you can just
>>>>
>>>>     sudo rm -rf /usr/local/texlive/2019basic
>>>>
>>>> and if you use homebrew you might have /usr/local owned by yourself so
>>>> you don't need the sudo.
>>>>
>>>> Time Machine is your friend (as I just noticed) :-)-O
>>>>
>>>> el
>>>>
>>>>
>>>> On 13/05/2020 15:34, peter dalgaard wrote:
>>>>> Hmm, like Eberhard, I'm not too sure this is right.
>>>>>
>>>>> A look at ls -l /usr/local/bin should be informative though.
>>>
>>> ls -l /usr/local/bin
>>> total 460456
>> [...]
>>>>> I haven't been paying that close attention, but I think the history is
>>>>> that TeX programs used to live in /usr/local/bin, but then Apple did
>>>>> something(?)  so now they go to Library/TeX/texbin (and are really
>>>>> links that via several levels of indirection end up somewhere in
>>>>> /usr/local/texlive).  However, old installs may still have binaries or
>>>>> links in /usr/local/bin.  I would guess that a simple
>>>>>
>>>>> sudo rm /usr/local/bin/pdflatex
>>>>>
>>>>> could work (possibly remove some other *tex programs as well).
>>>>>
>>>>> -pd
>> [...]
>>
>
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--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: [hidden email]  Priv: [hidden email]

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